| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3267 |
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| Symbol | rnc |
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| ID | 4673936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3452099 |
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| End bp | 3452785 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639840307 |
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| Product | ribonuclease III |
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| Protein accession | YP_987466 |
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| Protein GI | 121595570 |
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| COG category | [K] Transcription |
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| COG ID | [COG0571] dsRNA-specific ribonuclease |
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| TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0395589 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCAACCGG CCAGTCTCTC CACACTGCAG CAACGCCTGC AGCATCAGTT CTCCGATGCG
TCGCTGCTGC AGCGCGCGCT CACCCACCGC AGCTTCAGCG CGGACCACAA CGAACGGCTG
GAATTCCTGG GCGACTCGGT GCTGAGCCTC GCGGTCTCCA GCCTGCTGTT TCGCCGCATG
CGCGACCTGC CCGAAGGGGA GTTGTCGCGC GTGCGTGCAC TGCTCGTCAA GCAGGACTCG
CTGCACCAGA TCGCCGTGCG GCTGCAGTTG CCGCCGGTGC TGCGCCTGGG GGAGGGCGAG
GCCAAGTCCG GCGGCAAGCT GCGCCCGTCC ATCCTGGCCG ATGCATTGGA AGCGATCATC
GGTGCGGTGT ACCTGGATGC GGGCTATGAG TGCGCCGAGC AGCTGGTGCA CCGCCTGTTC
GAGGGCGTGG AGTTGAGTCC GCGCTTGCAG GAGGCGGCGA AGGATGCCAA GACCGCGTTG
CAGGAGTGGC TGCAGGGCCG CAAAATGAAT CTGCCTCAGT ACCGGGTCGT CTCCACCACG
GGCGCCGCGC ACAACCAGGT GTTCCATGTG GAGTGCGAGG TGGTCGAGTT GCAGCGCGTG
GAGCGCGGCA GCGGCGCATC GCGCCGCGCC GCTGAGCAGG CCGCCGCCGG TGCCATGCTG
GCCCAGTTGA AAGCGAAAAA CGTATGA
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| Protein sequence | MQPASLSTLQ QRLQHQFSDA SLLQRALTHR SFSADHNERL EFLGDSVLSL AVSSLLFRRM
RDLPEGELSR VRALLVKQDS LHQIAVRLQL PPVLRLGEGE AKSGGKLRPS ILADALEAII
GAVYLDAGYE CAEQLVHRLF EGVELSPRLQ EAAKDAKTAL QEWLQGRKMN LPQYRVVSTT
GAAHNQVFHV ECEVVELQRV ERGSGASRRA AEQAAAGAML AQLKAKNV
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