Gene Ajs_3259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3259 
Symbol 
ID4672893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3443868 
End bp3444320 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content67% 
IMG OID639840299 
Productalkylhydroperoxidase 
Protein accessionYP_987458 
Protein GI121595562 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.101599 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0335337 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGAAC GGGTGAATCT TAGAAAGAGC GCCCCCGCGC TGTATCAGGC GGTGGTGGAG 
TTGGACCGGT TGGCGTCCGA GGCTGCGGCA CAGGCCGGCA TCGCGACGGG GTTCGCGCAC
CTCCTGCGCC TGCGGGCATC CCAGCTCAAC CAGTGCGCCT TCTGCGTCAG GCTGCACGCA
CGGGACGCGC TGGCCAGCCA GGAGAGCGGC GACCGCATTG CGGTGCTGCC CGCGTGGCGT
GAAACCGATT ATTTCAGCCC GAAGGAGCGC GCCGCTCTGG AACTGGTGGA GGCCGTCACC
TTGGTCGCGG ATGGGCAGGT GCCCGATGCC GTTTACGCGC AGGCAGCTGG CGTCTTGTCC
AAGGAGGAGA TAGCCGCCGT TGAATGGCTG GCGGTGGTCA TCAACGCCTG GAACCGGATC
GCCATCTCCA GCCGCTACCC CGTCAGGGCC TGA
 
Protein sequence
MRERVNLRKS APALYQAVVE LDRLASEAAA QAGIATGFAH LLRLRASQLN QCAFCVRLHA 
RDALASQESG DRIAVLPAWR ETDYFSPKER AALELVEAVT LVADGQVPDA VYAQAAGVLS
KEEIAAVEWL AVVINAWNRI AISSRYPVRA