Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3259 |
Symbol | |
ID | 4672893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3443868 |
End bp | 3444320 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639840299 |
Product | alkylhydroperoxidase |
Protein accession | YP_987458 |
Protein GI | 121595562 |
COG category | [S] Function unknown |
COG ID | [COG2128] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.101599 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0335337 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTGAAC GGGTGAATCT TAGAAAGAGC GCCCCCGCGC TGTATCAGGC GGTGGTGGAG TTGGACCGGT TGGCGTCCGA GGCTGCGGCA CAGGCCGGCA TCGCGACGGG GTTCGCGCAC CTCCTGCGCC TGCGGGCATC CCAGCTCAAC CAGTGCGCCT TCTGCGTCAG GCTGCACGCA CGGGACGCGC TGGCCAGCCA GGAGAGCGGC GACCGCATTG CGGTGCTGCC CGCGTGGCGT GAAACCGATT ATTTCAGCCC GAAGGAGCGC GCCGCTCTGG AACTGGTGGA GGCCGTCACC TTGGTCGCGG ATGGGCAGGT GCCCGATGCC GTTTACGCGC AGGCAGCTGG CGTCTTGTCC AAGGAGGAGA TAGCCGCCGT TGAATGGCTG GCGGTGGTCA TCAACGCCTG GAACCGGATC GCCATCTCCA GCCGCTACCC CGTCAGGGCC TGA
|
Protein sequence | MRERVNLRKS APALYQAVVE LDRLASEAAA QAGIATGFAH LLRLRASQLN QCAFCVRLHA RDALASQESG DRIAVLPAWR ETDYFSPKER AALELVEAVT LVADGQVPDA VYAQAAGVLS KEEIAAVEWL AVVINAWNRI AISSRYPVRA
|
| |