| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3257 |
|---|
| Symbol | |
|---|
| ID | 4672789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 3442151 |
|---|
| End bp | 3442864 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639840297 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_987456 |
|---|
| Protein GI | 121595560 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.578651 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0886987 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCAGC CCATGCTGCA AGTAGAAAAC CTGTCCACGC ACTACGGCGC GATCTGCGCC
GTGAATGGCG TGAGCCTGCA CGTGAACCAG GGCGAAATCG TCTCGCTGAT CGGCTCCAAT
GGCGCGGGCA AGACCTCGCT GCTCATGACC CTGTGCGGCA CGCCGCGCGC CAGCGGCGGC
ACCGTGCGCT TCGAGGGCGA GGACATCACC CAGCAACCCA CGCACCTCAT CATGCGCAAG
GGCATCGCCG TCTCGCCCGA GGGACGCCGC ATCTTCTCGA ACCTGACCGT GGTCGAGAAC
CTGAAGATGG GCGGCTTCTT CCAGGACGGC GCTGCCATTG AGGAGGGCAT GGAACACGTG
TTCAAGCTGT TTCCGCGCCT GAAGGACCGC GCAGCGCAGC GTGCCGGCAC CATGTCGGGT
GGCGAGCAGC AGATGCTGGC CATCGGCCGC GCGCTGATGA GCAAGCCCCG CCTGCTGCTG
CTGGACGAGC CCACGCTGGG CCTGGCGCCG CTGATCATTG CGCAGATCTT CGAGATCATC
CAGGCCATCC GTGCCGAGGG CGTGACCGTG TTTCTGGTGG AGCAGAACGC CAACCGCGCC
CTGCAGATCG CCGACCGCGG CTACGTGCTG GAAAACGGCC GCGTGGTGCT GGAGGACACC
GGCGCCGCCC TGCTCACCAA TGCGGACGTG CGCAAGGCCT ATCTGGGCGC TTGA
|
|---|
| Protein sequence | MAQPMLQVEN LSTHYGAICA VNGVSLHVNQ GEIVSLIGSN GAGKTSLLMT LCGTPRASGG
TVRFEGEDIT QQPTHLIMRK GIAVSPEGRR IFSNLTVVEN LKMGGFFQDG AAIEEGMEHV
FKLFPRLKDR AAQRAGTMSG GEQQMLAIGR ALMSKPRLLL LDEPTLGLAP LIIAQIFEII
QAIRAEGVTV FLVEQNANRA LQIADRGYVL ENGRVVLEDT GAALLTNADV RKAYLGA
|
|---|
| |