| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3255 |
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| Symbol | livM |
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| ID | 4673131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 3440146 |
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| End bp | 3441387 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639840295 |
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| Product | leucine/isoleucine/valine transporter permease subunit |
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| Protein accession | YP_987454 |
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| Protein GI | 121595558 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.632438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0967059 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGCCA CCGGTTTTTC TTCCCATCTC AAGAACGCGC TGATCGCCAC CTTTCTGGCG
GCCATCGTGG TACTGCCCAT CTTCACGCTG CACCTGGAGC GCGCAGGCAC GCGCACCATC
ATCGTGCCCG AGTGGCGCAC GCTGCTGTGG GGGTGCCTCG CCGTGTTCGT GGTGCAGCTG
CTGCGCCCGC TGCTGGGCGC GCGGCTGCCC AAGCTGTCGC TGCCCAGCCT GCCTCAGGCG
GCGCCGGGCC AGCGCAAGGT GCTGATCTTC GTGGCGCTGA TGATCGCGGC ATCGTGGCCG
TTCTTCGCCG GCCGCAACGC CGTGGACATC GCCACGCTGG CCATGATCTA TGTGATGCTG
GGCCTCGGCC TGAACATCGT GGTGGGCTTC GCCGGCCTGT TGGACCTGGG CTTCGTGGGC
TTCTATGCCG TGGGTGCCTA CACCTATGCG CTGCTGTTCC ACTGGGCCGG CTGGAGCTTC
TGGGAAGCCC TTCCCCTGGC CGGCGCGGCG GCGGCGCTGT TCGGCTTCGT GCTAGGCTTT
CCAGTGCTGC GCCTGCGGGG TGACTATCTG GCCATCGTGA CGCTGGGCTT TGGCGAAATC
ATCCGGCTGC TGCTGGTCAA CCTGACCGAC TGGACGGGCG GGCCGGACGG CATCTCCAGC
ATCCCCAAGC CGTCCGTGCT GGGCCTGGAG ATGACGCGCT CGCCCACCGT GGAGGGCGGC
ACCACCTTCC ACCAGTTCTT CGGGATGGAG TTCAACTCCC TGCACATGGT GATCGCCCTG
TACCTGATGG CGCTGCTGCT CGCGGTGGTC ACGCTGTTCA TCAGCAACCG CCTGATCCGC
ATGCCCATCG GCCGCGCCTG GGAGGCACTG CGCGAGGACG AGATCGCCTG CCGGTCGCTG
GGCCTGAACC CCATGAAGAT CAAGCTCTCG GCCTTCACGC TGGGCGCCAT GTTCGCGGGC
TTCGGCGGCG CGTTCTTCGC GGCGCGCCAG GGCATCGTGA ACCCCGAGTC GTTCACCTTC
ATCGAGTCTG CGCTGATCCT GGCCATCGTG GTGCTGGGCG GCATGGGCTC GCAGCTGGGC
GTGATCGTGG CGGCCATCAT CCTCACCGTG TTGCCCGAAC TGGCACGCGA ATTCTCCGAG
TACCGCATGC TGATCTTCGG CCTGGTCATG ATCCTGATGA TGGTGTGGCG CCCGCAGGGC
CTGCTGCCCA TGAAACGCCA CCATGTGGAG GTGCCCGCAT GA
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| Protein sequence | MHATGFSSHL KNALIATFLA AIVVLPIFTL HLERAGTRTI IVPEWRTLLW GCLAVFVVQL
LRPLLGARLP KLSLPSLPQA APGQRKVLIF VALMIAASWP FFAGRNAVDI ATLAMIYVML
GLGLNIVVGF AGLLDLGFVG FYAVGAYTYA LLFHWAGWSF WEALPLAGAA AALFGFVLGF
PVLRLRGDYL AIVTLGFGEI IRLLLVNLTD WTGGPDGISS IPKPSVLGLE MTRSPTVEGG
TTFHQFFGME FNSLHMVIAL YLMALLLAVV TLFISNRLIR MPIGRAWEAL REDEIACRSL
GLNPMKIKLS AFTLGAMFAG FGGAFFAARQ GIVNPESFTF IESALILAIV VLGGMGSQLG
VIVAAIILTV LPELAREFSE YRMLIFGLVM ILMMVWRPQG LLPMKRHHVE VPA
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