| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3242 |
|---|
| Symbol | |
|---|
| ID | 4671917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 3426800 |
|---|
| End bp | 3427348 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639840282 |
|---|
| Product | protein of unknown function YGGT |
|---|
| Protein accession | YP_987441 |
|---|
| Protein GI | 121595545 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTTTC AAATTCTGTC TTTTCTCCTC GACGTTGCCA GCGGCCTGCT TACCGGGGCT
TGCCTGTTGC GGCTGTACAT GCAGCTGCAG CGGGTGTCGT TTGCCAATCC CGTGGGCCGT
CTCGTGTTTG CCCTGAGCGA CTGGCTGGTG CTGCCACTGC GCAAGCTCGT TCCGTCGGCG
GGGCGGTGGG ATCTGTCCTG CCTTGCGGCG GCGGTGCTGC TGCAACTGGT CCAGTATCTG
CTGCTGTGGC TTCTGGTGGG CGGGGGGATA GGACTGGCCT GGCTGCCGTG GATGGCGCTT
TTTGGCCTGG CGCGCGTGGC CGTGTCGGGA CTGATGGGCT TGCTGATCGT TTATGCCGTG
CTCTCGTGGG TGCAGACGCG ATCGCCCATC AGCGATGTGA TCACCCGCCT GTGCGAGCCG
TTGTTGCACC CCGTGCGCCG TGTTCTGCCG TTACTGGGCG GGGTGGACCT GTCGCCGCTG
GTGGTGCTGG TGTTGCTGCA GGTCGTGATG ATCGTGCTGG GGCATCTGCA GGCCAGCGTC
ATGATGTAG
|
|---|
| Protein sequence | MLFQILSFLL DVASGLLTGA CLLRLYMQLQ RVSFANPVGR LVFALSDWLV LPLRKLVPSA
GRWDLSCLAA AVLLQLVQYL LLWLLVGGGI GLAWLPWMAL FGLARVAVSG LMGLLIVYAV
LSWVQTRSPI SDVITRLCEP LLHPVRRVLP LLGGVDLSPL VVLVLLQVVM IVLGHLQASV
MM
|
|---|
| |