| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3237 |
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| Symbol | truA |
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| ID | 4671559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 3422149 |
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| End bp | 3422973 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639840277 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_987436 |
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| Protein GI | 121595540 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGGTGG CCCTCGGCGT CAGCTACAAC GGTCAGGCAT ACAACGGCTG GCAGAGTCAG
CCCTCTGCCA ACACGGTGCA AGACCGTCTG GAAGCGGCCC TGGGTCGCTT TGCCACGCAG
GAGGTGCACA CGATCTGTGC CGGGCGTACT GACGCCGGCG TGCACGGGCT GATGCAGGTG
GTGCACTTCG ATACGGAACT GCAGCGTGCG CCGTTTTCAT GGGTCCGCGG CACCAACACC
TTCCTGCCGG CGGACATCGC CGTGCAGTGG GCGCAACCCG TTCCCGATGC CTTTCATTCG
CGCGCCTGCG CCGTGGCCCG GCGCTATGCC TACGTATTGC TGCAGTCGCC CGTACGCCCC
AGCGTTGATG CCGGGCGCGT GGGTTGGGTC TTTCATGCCC TCGATGAGCA GGCCATGCAC
AAGGCCGTGC AGCATTTGCT GGGCGAGCAT GACTTCACGT CATTTCGCGC CTCGGCCTGC
CAGGCCAAGT CGCCGGTGAA GACATTGCAC CGCATCGACA TCACACGCCG GGCTCCGCCA
GCGGGCGAAT CCACCGGCAC CCACGGGTGT GTCCCCTGCT ACTGGCGCTT TGAATTCGAA
GGCAATGCGT TCCTGCACCA CATGATCCGC AACATCATGG GCTGCATCGT CGCCATTGGC
CAGGGGCTGT ATCCGCCCGA ATGGATGCGC ACGGTGCTGG AGGCGCGGTC GCGCGACGCG
GCTGCTCCTA CCTTTTCGCC CGATGGCCTG TACTTCCAGG GCCCGGTATA CGGCGCGGAA
TGGGGCCTGC CGACGCGCAC GGCTGCGTAT GATTGGCTGC CATGA
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| Protein sequence | MRVALGVSYN GQAYNGWQSQ PSANTVQDRL EAALGRFATQ EVHTICAGRT DAGVHGLMQV
VHFDTELQRA PFSWVRGTNT FLPADIAVQW AQPVPDAFHS RACAVARRYA YVLLQSPVRP
SVDAGRVGWV FHALDEQAMH KAVQHLLGEH DFTSFRASAC QAKSPVKTLH RIDITRRAPP
AGESTGTHGC VPCYWRFEFE GNAFLHHMIR NIMGCIVAIG QGLYPPEWMR TVLEARSRDA
AAPTFSPDGL YFQGPVYGAE WGLPTRTAAY DWLP
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