| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3229 |
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| Symbol | |
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| ID | 4671094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 3412948 |
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| End bp | 3414369 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639840269 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_987428 |
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| Protein GI | 121595532 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0550685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACGCA CCCTGTACGA CAAGATCTTC GACGAGCACG TCGTCCACAC GGAAGAGGAC
GGCACCGCCG TGCTCTACAT CGACCGCCAC CTGGTGCATG AGGTGACCAG CCCGCAGGCC
TTCGAAGGCC TGCGCGAGGC GGGCCGCAAG GTCTGGCGCG TGAGCTCCAT CGTGGCCACG
GCCGACCACA ACACCCCCAC CACCGGGTGG GAGCGCGGCT ACGACGGCAT TGCCGACCCG
ATCAGCAAGG AGCAGATCGT CACGCTGGAC AAGAACATCC AGGAGTCCGG TGCGGCGGCG
TTCTTCCCGT TCCTGTCCAA GCGCCAGGGC ATCGTGCACG TGATCGGCCC CGAGAACGGC
GCCACCCTCC CGGGCATGAC CGTGGTCTGC GGCGACAGCC ACACCAGCAC CCACGGCGCG
TTCGGCGCGC TGGCCCACGG CATCGGCACC AGCGAGGTGG AGCACGTGAT GGCCACGCAG
ACCCTGCTGG CCAAGAAGGC CAAGAACATG CTGGTCAAAG TGAATGGCAA GGTCGCCCCT
GGCATCACGG CCAAGGACAT CGTGCTGGCC ATCATCGGCA AGATCGGCAC CGCCGGCGGC
ACGGGTTACA CGATTGAATT TGCCGGTGAA GCCATCCGCG ACCTGAGCAT GGAAGGCCGC
ATGACCGTGT GCAACATGGC CATCGAAGCC GGCGCCCGCG CGGGCCTGGT GGCAGTGGAC
GACAAGACGA TCAACTACGT GAAGGGCCGC CCGCTCGCAC CCACGGGCGT GGAGTGGGAC
CAGGCCGTGG CGTACTGGAA GACGCTGCAC TCGGACGCGG ACGCCAAGTT CGACGCGGTG
GTGGAGTTGA ACGCCGCCGA GATCGTGCCG CAGGTCACCT GGGGCACCAG CCCCGAGATG
GTGCTGGGCA TCGACGCCGT GGTGCCCGAC CCGGACAAGG AGAAGGACCC GTCCAAGCGC
GGCGCCATCG AGCGTGCGCT GACCTACATG GGTCTGCAGC CCGGCAAGCC GATGGATGAC
ATCTTCGTGG ACAAGGTGTT CATCGGCTCG TGCACCAACA GCCGCATCGA GGACATGCGC
GAAGCCGCCG CCGTGGTGAA GAAGCTCGGC CAGAAGGTCG CCAAGAACAT CAAGCTGGCC
ATGGTGGTAC CTGGCTCGGG CCTGGTGAAG GAACAGGCCG AACGCGAGGG GCTGGATGCG
ATTTTCAAGG CCGCGGGCTT TGAATGGCGC GAGCCCGGTT GCTCCATGTG CCTGGCCATG
AATGCCGACC GCCTGGAGCC CGGCGAGCGC TGCGCTTCCA CGTCCAACCG CAACTTCGAA
GGCCGCCAGG GCGCGGGCGG GCGCACGCAC CTCGTGAGCC CCGCCATGGC CGCGGCCGCC
GCCATCCACG GCCACTTCGT GGACATCCGC CAATTCGCCT GA
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| Protein sequence | MGRTLYDKIF DEHVVHTEED GTAVLYIDRH LVHEVTSPQA FEGLREAGRK VWRVSSIVAT
ADHNTPTTGW ERGYDGIADP ISKEQIVTLD KNIQESGAAA FFPFLSKRQG IVHVIGPENG
ATLPGMTVVC GDSHTSTHGA FGALAHGIGT SEVEHVMATQ TLLAKKAKNM LVKVNGKVAP
GITAKDIVLA IIGKIGTAGG TGYTIEFAGE AIRDLSMEGR MTVCNMAIEA GARAGLVAVD
DKTINYVKGR PLAPTGVEWD QAVAYWKTLH SDADAKFDAV VELNAAEIVP QVTWGTSPEM
VLGIDAVVPD PDKEKDPSKR GAIERALTYM GLQPGKPMDD IFVDKVFIGS CTNSRIEDMR
EAAAVVKKLG QKVAKNIKLA MVVPGSGLVK EQAEREGLDA IFKAAGFEWR EPGCSMCLAM
NADRLEPGER CASTSNRNFE GRQGAGGRTH LVSPAMAAAA AIHGHFVDIR QFA
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