Gene Ajs_3218 details

Gene Information

• Locus tag: Ajs_3218
• Symbol: dnaK
• ID: 4670595
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax sp. JS42
• Kingdom: Bacteria
• Replicon accession: NC_008782
• Strand: +
• Start bp: 3400650
• End bp: 3402590
• Gene Length: 1941 bp
• Protein Length: 646 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 639840258
• Product: molecular chaperone DnaK
• Protein accession: YP_987417
• Protein GI: 121595521
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 36
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGAAAAA TCATCGGTAT TGACCTGGGC ACCACCAACA GCTGCGTGGC CATCATGGAA 
GGCAACAACA CGCGCGTGAT CGAGAACAGC GAAGGCGCGC GCACCACGCC GTCCATCATC 
GCGTACCAGG AAGACGGTGA GATTCTGGTG GGCGCCTCTG CCAAGCGGCA GGCCGTGACC 
AACCCCAAGA ACACCATCTA CGCCGCCAAG CGCCTGATCG GCCGCAAGTT CGACGAGAAG 
GAAGTGCAGA AGGACATCGA CCTGATGCCC TTCACCATCA CCCGCGCCGA CAACGGCGAT 
GCCTGGGTGG AAGTGCGCGG CCAGAAGCTG GCCCCCCCGC AGATCTCCGC GGAAGTGCTG 
CGCAAGATGA AGAAGACCGC CGAGGACTTC CTGGGCGAGC CGGTGACCGA GGCCGTGATC 
ACGGTTCCCG CATACTTCAA CGACGCTCAG CGTCAGGCCA CCAAGGACGC CGGCCGTATC 
GCGGGCCTGG ATGTGAAGCG CATCATCAAT GAGCCTACCG CCGCCGCGCT GGCTTTCGGC 
CTGGACAAGC AGGACAAGGG CGACCGCAAG ATCGCCGTGT ATGACCTGGG TGGTGGCACG 
TTCGACGTGT CTATCATCGA GATCGCCGAC GTCGATGGCG AAAAGCAGTT CGAAGTGCTG 
TCCACCAACG GCGACACTTT CCTGGGCGGC GAGGACTTCG ACCAGCGCAT CATCGACTAC 
ATCATCGGCG AGTTCAAAAA GGAACAGGGC GTGGACCTGT CCAAGGACGT GCTGGCCTTG 
CAGCGCCTGA AGGAAGCCGC CGAGAAGGCC AAGATCGAGC TGTCGAACTC CTCGCAGACC 
GACATCAACC TGCCCTACAT CACGGCCGAT GCCTCGGGTC CCAAGCACCT GAACATCAAG 
CTGACCCGCG CCAAGCTGGA ATCGCTGGTA GAAGACCTGA TTGAGCGCAC CATCGCGCCC 
TGCCGCACGG CCATCAAGGA CGCCGGCATC TCCGTGTCCG ACATCGACGA CGTGATCCTG 
GTCGGCGGCA TGACCCGCAT GCCCAAGGTG CAGGAAAAGG TCAAGGAATT CTTCGGCAAG 
GAACCCCGCA AGGACGTGAA CCCCGACGAA GCCGTGGCCG TGGGCGCAGC CATCCAGGGC 
CAGGTGCTGT CGGGCGACCG CAAGGACGTG CTGCTGCTGG ACGTGACGCC GCTGTCGCTG 
GGCATCGAGA CCCTGGGCGG CGTGATGACC AAGATGATCA CGAAGAACAC CACGATCCCG 
ACGAAGTTCG CGCAGACCTT CTCGACGGCC GAGGACAACC AGCCCGCCGT GACGATCAAG 
GTGTTCCAGG GCGAGCGCGA GATTGCCAGC GCCAACAAGC TGCTGGGCGA GTTCAACCTG 
GAAGGCATTC CCCCGGCGTC GCGCGGCACG CCCCAGATCG AAGTGACCTT TGACATCGAC 
GCCAACGGCA TCCTGCACGT GGGCGCCAAG GACAAGGGCA CGGGCAAGGA GAACAAGATC 
ACCATCAAGG CCAACTCCGG CCTGTCCGAG GACGAGATCC AGAAGATGGT GAAGGACGCC 
GAGCTCAACG CCGCCGACGA CAAGAAGAAG CTGGAGCTGG TGCAGGCCCG CAACCAGGGT 
GAGGCCGCCG TGCACACCGT GACCAAGAGC CTGTCCGAGC ACGGCGACAA GCTGGACGCC 
GGTGAGAAGG AAAAGATCGA GGCCGCCGTC AAGGACCTGG AAGCTGCCCT CAAGACCGAG 
GACAAGGCCG CCATCGACGA GAAGACCACC GCACTGATGG CTGCCAGCCA GAAGCTCGGC 
GAGAAGATGT ACGGCGATGC GCAGGCCGCT CAAGGGGCCG AGGCTGCGGG TGCGCAAGCT 
GCCGCCAGTG GCTCCGCCGG CGCCGCCGCG CAGGACGACA ACGTGGTGGA TGCCGAGGTC 
AAGGAAGTCA AGAAGGGCTG A 

 

Protein sequence

MGKIIGIDLG TTNSCVAIME GNNTRVIENS EGARTTPSII AYQEDGEILV GASAKRQAVT 
NPKNTIYAAK RLIGRKFDEK EVQKDIDLMP FTITRADNGD AWVEVRGQKL APPQISAEVL 
RKMKKTAEDF LGEPVTEAVI TVPAYFNDAQ RQATKDAGRI AGLDVKRIIN EPTAAALAFG 
LDKQDKGDRK IAVYDLGGGT FDVSIIEIAD VDGEKQFEVL STNGDTFLGG EDFDQRIIDY 
IIGEFKKEQG VDLSKDVLAL QRLKEAAEKA KIELSNSSQT DINLPYITAD ASGPKHLNIK 
LTRAKLESLV EDLIERTIAP CRTAIKDAGI SVSDIDDVIL VGGMTRMPKV QEKVKEFFGK 
EPRKDVNPDE AVAVGAAIQG QVLSGDRKDV LLLDVTPLSL GIETLGGVMT KMITKNTTIP 
TKFAQTFSTA EDNQPAVTIK VFQGEREIAS ANKLLGEFNL EGIPPASRGT PQIEVTFDID 
ANGILHVGAK DKGTGKENKI TIKANSGLSE DEIQKMVKDA ELNAADDKKK LELVQARNQG 
EAAVHTVTKS LSEHGDKLDA GEKEKIEAAV KDLEAALKTE DKAAIDEKTT ALMAASQKLG 
EKMYGDAQAA QGAEAAGAQA AASGSAGAAA QDDNVVDAEV KEVKKG