Gene Ajs_3217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3217 
Symbol 
ID4670777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3400026 
End bp3400562 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content65% 
IMG OID639840257 
Productheat shock protein GrpE 
Protein accessionYP_987416 
Protein GI121595520 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGA ACCAGAATCC CCCTCCCTCT CCTGAAGAGA TTGAAGCAGC GATGTCCGCC 
AATGCCGCCG ACGAACTGAA CCGCCTGCAG GGCGAACTGG CCGAGCTCAA AGCCAAGAGC
GCCGACCTGG CCGATCAATT TTTGCGCGCC AAGGCCGAGG CCGAGAATGC CCGACGGCGT
GCGGAGGATG AGGTAGCCAA GGCCCGCAAG TTCGGCATCG AGAGCTTCGC CGAAAGCCTG
CTGCCTGTCT GCGACAGCCT GGACGCCGCC CTGGCCATCG AGAACGCCAC GGCCGAGCAA
CTGCGCGAGG GGTCGGACGC CACCCTGCGC CAGCTGATGT CGGCGCTGGA GCGCAACAAG
GTGGTCATCG TGAACCCCGA GGCCGGCACC AAGTTCGACC CGCACCAGCA CCAGGCCATC
AGCATGGTGC CCGCCGACCA GGAAGCCAAC ACCGTCGTGA GCGTGCTGCA AAAGGGCTAT
CTGATCTTTG ACCGCGTCCT GCGCCCTGCG CTGGTCACGG TGGCCGCGCC CAAGTAA
 
Protein sequence
MSENQNPPPS PEEIEAAMSA NAADELNRLQ GELAELKAKS ADLADQFLRA KAEAENARRR 
AEDEVAKARK FGIESFAESL LPVCDSLDAA LAIENATAEQ LREGSDATLR QLMSALERNK
VVIVNPEAGT KFDPHQHQAI SMVPADQEAN TVVSVLQKGY LIFDRVLRPA LVTVAAPK