Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3206 |
Symbol | |
ID | 4670934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3390525 |
End bp | 3391886 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639840246 |
Product | homoserine dehydrogenase |
Protein accession | YP_987405 |
Protein GI | 121595509 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0460] Homoserine dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCGA TCCAAGTGGG CCTGCTGGGC ATTGGCACCG TGGGCAGCGG CGTGTTCAAC GTCCTGTCGC GCAACCAGGA AGAAATCCGC CGCCGCGCCG GCCGCGGCAT CGAGATTGCT TGTGTGGCCG ACCTGGACAC CGCCCGCGCA CGCGCCATCG TGGGCGAGAA CGCCCGCTTG GTGGGCGATG CGCGCGAAGT GATCGCCAAC CCTGAGATCG ACATCGTGGT CGAGCTGATC GGCGGCTACG GCATCGCCAA GCAGCTGGTG CTGGAGGCGA TCGCCGCCGG CAAGCATGTC GTGACGGCCA ACAAGGCCCT GCTGGCCGTG CATGGCACGG AGATCTTCAA GGCCGCGGCC GAGAAGGGGG TGGTGGTCGC CTACGAGGCG GCGGTGGCCG GCGGCATTCC GATCATCAAG GCGCTGCGCG AAGGCCTGGC GGCCAACCAG ATCCAGTGGG TGGCCGGCAT CATCAACGGC ACGACCAACT TCATCCTGTC CGAGATGCGC GACAAGGGCC TGGACTTCGA TGTGGTGCTC AAGGAAGCCC AAGCGTTGGG CTACGCCGAG GCCGACCCCA CCTTCGACAT CGAGGGCGTG GACGCCGCCC ACAAGGCCAC CATCATGAGC GCCATCGCCT TCGGTATCCC GGTGCAGTTC GACAAGGCCT ACGTGGAGGG CATCACCAAG CTGTCCGCCG TCGACATCCG CTATGCCGAG CAACTGGGCT ACCGCATCAA GCTGCTGGGG ATCGCCAAGC GCCGCCAGGG CGACGCGACC AAGCGCACGC CCGATGGCGT GGAGCTGCGC GTGCACCCCG CGCTGGTACC GGCCAAGCGC CTGATCGCCA ATGTCGAAGG CGCGATGAAC GCCGTGGTGG TGCACGGGGA CGCCGTGGGC ACCACGCTGT ACTACGGCAA GGGCGCGGGC AGCGAGCCCA CCGCCAGCGC CGTGATCGCC GACCTGGTGG ACATCACCCG CCTGATCGAG GCCGACCCCG CGCACCGCGT GCCGCCGCTG GCCTTCCAGA GCCACACGCT GCGCGAGGCG GGGCAGGAGC TGCCCGTGCT GCCCATGGCC GACGTGGTCA CCAGCTACTA CCTGCGCATC CGCGTGGCCG ACGAGGCCGG CGTGCTGGCC AAGATCACCG GCATCCTGGC CGGCGCGGGC ATCAGCATCG ACGCCGTGCT GCAGCGCGAG GCCGACGAGG TGGGCGGCGA AGGCAGCACG CAGACCGACC TGATCATCCT CACGCACGAC ACGCGCGAGG GCGACATGGA CGCCGCGCTC GCCCAAATCC AGGGCCTGCC CACGGTGCTG GCCAGCATCA CGCGCATCCG CAAGGAAGAG CTCAACAACT AA
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Protein sequence | MKPIQVGLLG IGTVGSGVFN VLSRNQEEIR RRAGRGIEIA CVADLDTARA RAIVGENARL VGDAREVIAN PEIDIVVELI GGYGIAKQLV LEAIAAGKHV VTANKALLAV HGTEIFKAAA EKGVVVAYEA AVAGGIPIIK ALREGLAANQ IQWVAGIING TTNFILSEMR DKGLDFDVVL KEAQALGYAE ADPTFDIEGV DAAHKATIMS AIAFGIPVQF DKAYVEGITK LSAVDIRYAE QLGYRIKLLG IAKRRQGDAT KRTPDGVELR VHPALVPAKR LIANVEGAMN AVVVHGDAVG TTLYYGKGAG SEPTASAVIA DLVDITRLIE ADPAHRVPPL AFQSHTLREA GQELPVLPMA DVVTSYYLRI RVADEAGVLA KITGILAGAG ISIDAVLQRE ADEVGGEGST QTDLIILTHD TREGDMDAAL AQIQGLPTVL ASITRIRKEE LNN
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