Gene Ajs_3193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3193 
Symbol 
ID4672070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3378540 
End bp3379712 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content73% 
IMG OID639840233 
Productmethyltransferase small 
Protein accessionYP_987392 
Protein GI121595496 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.455241 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCATT GGAGCGAACA CGGCGAGGAC CGCAGCGCGC CGTGGCGCTC CGAAGGCGGC 
GCCAGCGCGC CGCGCCGGGT GCTGTTGGCT GACGACACGC TGGCTGCCGA TGCGGCCTAT
CGCCTGGTAT GCGAAGGCAC GGCCCTGCTG TGGCGCGGCG ACTTTCAGAA CGCGCGCCAT
CTGCTGGACG CGCTCAAGCG CCGTATCGAA CGTCCGCGCA AGAGCGGCAA AGGCGGTCGG
AACAGCGCCG TGCCCGCGGC GGAGTTCCCG CACGCCTTTC ATTTGCATCG CCAGGCGCAG
GCACAGCGCG CCCGCCTGCT GGGGCTGCTG CTGATCGAGC TGCAGCCCGA CTGGGGCATC
GCCCTGCGCC GCGCGCCCGA CTGGCGCGCG GCCTGCGCCG AGGCCTGGGG CCCGGCGCTG
CAGGAGCCCA CCGTTGTCTC GCTGCGCGAG TTGCTGGGTG CCGTGGGGGC GCACGAATGG
CGCCGCAAGG GCGTGGATGT GCCCGCTCTG GGTGCACGCA TTTACCCGCA TTACGGCGTG
TTTTCGCCCG TGCGGGGCGA GTATGTGGAC CTGGTCGCCC AGGCCCCGCT GCCGCCGGGC
GCGGATGCGC TCGCTTTCGA GATCGGCACC GGCACCGGCG TGCTGGCCGC CGTGCTGGCA
CGGCGTGGCG TGGCCCGCGT GGTGGCGACC GAGTTGGACC CGCGTGCCCT GGCCTGCGCG
CGGGACAACC TGACGCGGCT GGGCCTGGAG GACCGCGTGC AGCTGCTGCA GACCGATCTG
TTCCCGCCCG CGACCACCTT CGGGCGGGCG CCACTCATCG TCTGCAACCC GCCCTGGCTG
CCGGCCAAGG CCAGCGCGCC CATCGAGCGC GCGGTGTATG ACGAAGACAG TCGCATGCTG
CGTGGTTTTC TGACGGGGCT GCCTGCGCAC CTGGCGCCGC ACGGCGAGGG ATGGCTCATC
CTGTCGGACC TGGCGGAGCA TTTGCGCCTG CGCACCCGCG ATGCACTGCT GGGCTGGATT
GGCGCCGCGG GGTTGCGGGT GCTGGGCCGC CACGACATCC GCCCGCGCCA CGCCAAGGCC
ACCGCCGGTG GCGATGCACT GGCCGGCGCG CGCGCGGCCG AGGTCACGTC GCTGTGGCGC
CTGGGTTTGG CGAGTCCGAC GCAACAGTCC TGA
 
Protein sequence
MIHWSEHGED RSAPWRSEGG ASAPRRVLLA DDTLAADAAY RLVCEGTALL WRGDFQNARH 
LLDALKRRIE RPRKSGKGGR NSAVPAAEFP HAFHLHRQAQ AQRARLLGLL LIELQPDWGI
ALRRAPDWRA ACAEAWGPAL QEPTVVSLRE LLGAVGAHEW RRKGVDVPAL GARIYPHYGV
FSPVRGEYVD LVAQAPLPPG ADALAFEIGT GTGVLAAVLA RRGVARVVAT ELDPRALACA
RDNLTRLGLE DRVQLLQTDL FPPATTFGRA PLIVCNPPWL PAKASAPIER AVYDEDSRML
RGFLTGLPAH LAPHGEGWLI LSDLAEHLRL RTRDALLGWI GAAGLRVLGR HDIRPRHAKA
TAGGDALAGA RAAEVTSLWR LGLASPTQQS