| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3189 |
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| Symbol | |
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| ID | 4672204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 3373997 |
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| End bp | 3374485 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639840229 |
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| Product | fimbrial protein pilin |
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| Protein accession | YP_987388 |
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| Protein GI | 121595492 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.535395 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATACC AGCACCGAGG TTTTACTCTG ATCGAGCTGA TGATCGTGGT GGCGATCGTC
GGCATTCTCT CGGCCATTGC CTACCCTAGC TATTCCGAGT ATGTGCGCCG TGGTCACCGG
GCAGATGCAC GCGCGGGGCT GTTGCAGGCA CAGCAGTGGT TGGAGCGTGC ATCGACAGCA
ACAGGGGTGT ATCCAACTAC ACCTGACGGA GGTACCACAC TGCCAAATTC GCTCCAGTGG
CGTCTTGCAG ATGGCACCGC TGATCCCACT AAACGCTACA CAATTGGATT TACCACAGAT
GCCGCATTTA ATACCCCGCC GCGCTGTCCA AGGAGCAACA ATGGTTGTTT TACCCTGATC
GCTACTCCCA ACGCAAATGG ACCACAGGCT AACGACAAAT GTGGCAGTTA TCTTTTGACG
CACACAGGAC GGCAAGGCAA CAATAATCTC GGCTCAGGCA CCACCTCTGC CGAATGCTGG
CGTAAATAA
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| Protein sequence | MKYQHRGFTL IELMIVVAIV GILSAIAYPS YSEYVRRGHR ADARAGLLQA QQWLERASTA
TGVYPTTPDG GTTLPNSLQW RLADGTADPT KRYTIGFTTD AAFNTPPRCP RSNNGCFTLI
ATPNANGPQA NDKCGSYLLT HTGRQGNNNL GSGTTSAECW RK
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