| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3182 |
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| Symbol | |
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| ID | 4672746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 3366046 |
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| End bp | 3366630 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639840222 |
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| Product | putative type-4 fimbrial pilin related signal peptide protein |
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| Protein accession | YP_987381 |
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| Protein GI | 121595485 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTCCT TTCTCTTAGC AAAGCACACC CGCGACGCCA AAAGACTCAG GAACAAGGGA
TTCACAGCCG TCGAATTGAT GGTCACCGTC GCTATCGTGG GCGTGCTTGC AGCCCTGGCG
GCTCCCAGTT TCTCTGCGCT CATTGAGCGC TGGCGCATCA CGCAGACCAC CGACATGTTG
AAGTCCACAC TGCACTACGC CCGCTCGGAG GCCATCAAGC GGGGCGGAAA CGTGCTCATC
CAGAAGATTG CCAACAACAC CAATGGCTGC ACCACCGCGA CCGGAAACGC CGACTGGGAC
TGCGGATGGT TCGTTTGCGA AGACACGAAC GGCAATGGCA CATGCAGTTC CACAGAGCCA
GTGTTGCAGC GCTATGAGAC TCCATCCAGG GTCCAGGTCA CCCGCACGGG CGGTGGCACC
GCCATCAAGC TCAATCGCTG GGGACTAGTG AATGGCACCT GGGTGGGTTT CAGCATCGTG
CCACTCGATC AATCAGTCAG TCACCCTGCT GCCCGCGGCG TTTGCATGAG CGCAGGCGGA
CGTATTCGCA CCATTCGATC GGAGGAACTT CCGTGCACGC CCTGA
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| Protein sequence | MPSFLLAKHT RDAKRLRNKG FTAVELMVTV AIVGVLAALA APSFSALIER WRITQTTDML
KSTLHYARSE AIKRGGNVLI QKIANNTNGC TTATGNADWD CGWFVCEDTN GNGTCSSTEP
VLQRYETPSR VQVTRTGGGT AIKLNRWGLV NGTWVGFSIV PLDQSVSHPA ARGVCMSAGG
RIRTIRSEEL PCTP
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