Gene Ajs_3163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3163 
Symbol 
ID4673469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3344963 
End bp3345463 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content67% 
IMG OID639840205 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_987364 
Protein GI121595468 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.878205 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACTGA CCCAGTGGAC CGACTACACG CTGCGCGTGC TCATGTACTG CGCCGCCTGC 
CAGGAGCGCG AGCAGCCCGT GACCATCAGC GAGGTGGCCG AGGCGCACGG CATCTCGCGC
AGCCATCTCA CGAAGATCGT GCAGCAACTC GCGGCCCAGG GGCTGCTGGA CACCACGCGC
GGGCGTGGTG GCGGCATGCG CCTGATGAAG CCGGCCAGCG AGATCAACCT GGGCCAGATC
GTGCGCATGA CGGAGACCGA CTTCGATATG GTCGAGTGCT TCAATGCCGA GTTGAACCAA
TGCCGCATGA GCAGCCACTG CCGTCTGCAA GCCGTGCTGT CCGACGCCAC GCGGGCCTAC
CTTGCAGTGC TGGACAGCTT CACCGTGGCC GATCTGGTCA CCCCGTCCAT CGCTGCGCAG
CGGCAGGGCG GGGCGGCGCT GGTGCAGTCC ATGCGCTGGG TGCCAGGGTT GCCCATCACC
CGCCCCGAGA CATTGGCGTA A
 
Protein sequence
MRLTQWTDYT LRVLMYCAAC QEREQPVTIS EVAEAHGISR SHLTKIVQQL AAQGLLDTTR 
GRGGGMRLMK PASEINLGQI VRMTETDFDM VECFNAELNQ CRMSSHCRLQ AVLSDATRAY
LAVLDSFTVA DLVTPSIAAQ RQGGAALVQS MRWVPGLPIT RPETLA