| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3147 |
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| Symbol | rimO |
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| ID | 4674112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3326061 |
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| End bp | 3327452 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639840188 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_987348 |
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| Protein GI | 121595452 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.317672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAG CACTCTCCCC CGCCAAGACC CCCAAGATCG GGTTCGTCAG CCTCGGCTGC
CCCAAGAACC TCACCGACTC CGAACTCCTC CTCACGCAAC TCAGCGCCGA GGGCTACGAA
ACCTCCAAGA CCTTCGAGGG CGCAGACCTC GTCATCGTCA ACACCTGCGG CTTCATCGAT
GAAGCCGTGA AGGAAAGCCT GGACACCATT GGCGAGGCCT TGGCCGAGAA CGGCAAGGTG
ATCGTTACCG GCTGCCTGGG CGCGCGCGCC GGCGAGACGG GCGGCAACCT CGTGAAAGAG
GTACACCCCA GCGTGCTGGC CGTGACCGGG CCGCATGCGG CGCAGGAAGT GATGGAGGTC
GTGCATACCC ACTGCCCCAA GCCGCACGAC CCCTTCCTTG ACCTGGTGCC GGGCGGCTTC
GGCGAGGCGG GCATCAAGCT CACGCCGCGC CACTATGCCT ACCTGAAGAT CAGCGAGGGC
TGCAACCACC GCTGCACCTT CTGCATCATC CCCTCGATGC GCGGCGACCT GGTGTCCCGC
CCGGTGGGCG ATGTGCTCAA GGAAGCCAAG GCGCTGTTCG AGGGTGGGGT GAAGGAACTG
CTGGTCATCA GCCAGGACAC ATCGGCCTAT GGCGTGGACG TGAAGTACCG CACGGGCTTC
TGGGACGGCA AGCCCGTCAA GACGCGCACG CTGGAGCTGG TGCAGAAGCT GGGCGAGATG
GCCGCCACCT ACGGCGCGTG GGTGCGCCTG CACTATGTCT ACCCCTACCC GAGCGTGGAC
GACATCATTC CGCTGATGGC GCAGGGCTTG GTGCTGCCGT ACCTGGATGT GCCCTTCCAG
CACAGCCACC CCGACGTGCT CAAGCGCATG AAGCGCCCCG CCAGCGGCGA GAAGAATCTG
GAGCGCATCC TGCGCTGGCG CGAGGCCTGC CCGGAGATCG TGATCCGCAG CACCTTCATC
GCGGGCTTCC CCGGCGAGAC GGAAGAAGAG TTCCAGCACC TGCTGGACTT CGTGCGCGAG
GCGCAGATCG ACCGTGCGGG CTGCTTTGCC TACAGCGACG TGGAGGGCGC CGCTGCCAAC
GAGCTGCCGG GCATGCTGCC CATGGAACTG CGCGAGGAGC GCCGTGCGCG CTTCATGGCG
GTGGCGGAGG AAGTCTCCAC CGCCAAGCTG CAGCGCCGCG TGGGCCAGAC CATGCAGGTG
CTGGTGGACC AGGCCGTGGG CCTGGGCAAG AAGGGCGGCG TGGGCCGCAG CTACGCCGAT
GCGCCCGAGA TCGACGGCGT GGTGCACCTG CTGCCGCCCG AGAAATTCAG CAAGACCTAC
AAGGTGGGCG ACTTCGTGAA GGCGCGCATC GTGGGAACGC AGGGGCATGA CCTGGTGGGC
GTGCCGGTGT AA
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| Protein sequence | MSQALSPAKT PKIGFVSLGC PKNLTDSELL LTQLSAEGYE TSKTFEGADL VIVNTCGFID
EAVKESLDTI GEALAENGKV IVTGCLGARA GETGGNLVKE VHPSVLAVTG PHAAQEVMEV
VHTHCPKPHD PFLDLVPGGF GEAGIKLTPR HYAYLKISEG CNHRCTFCII PSMRGDLVSR
PVGDVLKEAK ALFEGGVKEL LVISQDTSAY GVDVKYRTGF WDGKPVKTRT LELVQKLGEM
AATYGAWVRL HYVYPYPSVD DIIPLMAQGL VLPYLDVPFQ HSHPDVLKRM KRPASGEKNL
ERILRWREAC PEIVIRSTFI AGFPGETEEE FQHLLDFVRE AQIDRAGCFA YSDVEGAAAN
ELPGMLPMEL REERRARFMA VAEEVSTAKL QRRVGQTMQV LVDQAVGLGK KGGVGRSYAD
APEIDGVVHL LPPEKFSKTY KVGDFVKARI VGTQGHDLVG VPV
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