Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3122 |
Symbol | |
ID | 4673016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3297466 |
End bp | 3298236 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639840163 |
Product | ABC transporter related |
Protein accession | YP_987323 |
Protein GI | 121595427 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.30892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACG TCATACTGAA AACTTCTCGC CTCACCAAAG AATTCAAGGG CTTCACCGCA GTCAGCGACG TGAACCTGAG CGTGCGCCGT GGTTCCATCC ACGCATTGAT CGGGCCCAAC GGTGCGGGCA AGACCACCTG CTTCAACTTG CTGACCAAGT TCCTGGAGCC CACCTCGGGC ACCATCGAAT TCAACGGACA TGACATCACC CGAGAGCAGC CGGCGCAGAT CGCGCGGCGC GGCGTGATTC GCTCGTTCCA GATCTCGGCG GTGTTTCCGC ACCTGACGCT GTTGCAGAAC GTGCGCCTGG GCCTGCAGCG CAAGCTGGGC ACCAGCTACC ACTTCTGGCG CAGCGAAGCC AGCCTGCGCC AGCTGGAAGG GCGCGCCATG GAACTGCTGA CCGAAGTCGG TCTGCAAGAC CTGGCTGACG AGGTCACCGT CAACCTGCCT TACGGCCGCA AGCGCCCCCT GGAGATCGCC ACCACGCTGG CCATGGAGCC CGAATTGATG CTGCTGGACG AGCCCACGCA GGGCATGGGC CACGAAGACG TGGATCGCGT CACGCAGCTC ATCAAGAAGG TATCGGCCGG TCGCACCATT TTGATGGTGG AGCACAACAT GAAGGTCATC TCGACCATTG CCGATCGCAT CACGGTGCTG CAGCGCGGCG CTGTCCTGGC CGAAGGGCCT TACGAAGAAG TCTCAAAGAA TCCGCAAGTC ATGGAAGCGT ACATGGGCAC AACCGACGGC CAACTGCAGG GGGCGCACTG A
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Protein sequence | MSDVILKTSR LTKEFKGFTA VSDVNLSVRR GSIHALIGPN GAGKTTCFNL LTKFLEPTSG TIEFNGHDIT REQPAQIARR GVIRSFQISA VFPHLTLLQN VRLGLQRKLG TSYHFWRSEA SLRQLEGRAM ELLTEVGLQD LADEVTVNLP YGRKRPLEIA TTLAMEPELM LLDEPTQGMG HEDVDRVTQL IKKVSAGRTI LMVEHNMKVI STIADRITVL QRGAVLAEGP YEEVSKNPQV MEAYMGTTDG QLQGAH
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