Gene Ajs_3122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3122 
Symbol 
ID4673016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3297466 
End bp3298236 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content62% 
IMG OID639840163 
ProductABC transporter related 
Protein accessionYP_987323 
Protein GI121595427 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.30892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG TCATACTGAA AACTTCTCGC CTCACCAAAG AATTCAAGGG CTTCACCGCA 
GTCAGCGACG TGAACCTGAG CGTGCGCCGT GGTTCCATCC ACGCATTGAT CGGGCCCAAC
GGTGCGGGCA AGACCACCTG CTTCAACTTG CTGACCAAGT TCCTGGAGCC CACCTCGGGC
ACCATCGAAT TCAACGGACA TGACATCACC CGAGAGCAGC CGGCGCAGAT CGCGCGGCGC
GGCGTGATTC GCTCGTTCCA GATCTCGGCG GTGTTTCCGC ACCTGACGCT GTTGCAGAAC
GTGCGCCTGG GCCTGCAGCG CAAGCTGGGC ACCAGCTACC ACTTCTGGCG CAGCGAAGCC
AGCCTGCGCC AGCTGGAAGG GCGCGCCATG GAACTGCTGA CCGAAGTCGG TCTGCAAGAC
CTGGCTGACG AGGTCACCGT CAACCTGCCT TACGGCCGCA AGCGCCCCCT GGAGATCGCC
ACCACGCTGG CCATGGAGCC CGAATTGATG CTGCTGGACG AGCCCACGCA GGGCATGGGC
CACGAAGACG TGGATCGCGT CACGCAGCTC ATCAAGAAGG TATCGGCCGG TCGCACCATT
TTGATGGTGG AGCACAACAT GAAGGTCATC TCGACCATTG CCGATCGCAT CACGGTGCTG
CAGCGCGGCG CTGTCCTGGC CGAAGGGCCT TACGAAGAAG TCTCAAAGAA TCCGCAAGTC
ATGGAAGCGT ACATGGGCAC AACCGACGGC CAACTGCAGG GGGCGCACTG A
 
Protein sequence
MSDVILKTSR LTKEFKGFTA VSDVNLSVRR GSIHALIGPN GAGKTTCFNL LTKFLEPTSG 
TIEFNGHDIT REQPAQIARR GVIRSFQISA VFPHLTLLQN VRLGLQRKLG TSYHFWRSEA
SLRQLEGRAM ELLTEVGLQD LADEVTVNLP YGRKRPLEIA TTLAMEPELM LLDEPTQGMG
HEDVDRVTQL IKKVSAGRTI LMVEHNMKVI STIADRITVL QRGAVLAEGP YEEVSKNPQV
MEAYMGTTDG QLQGAH