| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3120 |
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| Symbol | |
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| ID | 4672533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3295503 |
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| End bp | 3296705 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639840161 |
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| Product | putative substrate-binding periplasmic (pbp) ABC transporter protein |
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| Protein accession | YP_987321 |
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| Protein GI | 121595425 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.347887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAGA CACTCAAGAC ACTGGTCGCA GTGATGGGGG CCGCCGGCCT GGCGGTATCC
GCCATGCAGG CCCATGCACA GGACAAGGTG AAGATCGGCT TCATCACCGA CATGTCCAGC
CTCTATGCCG ACGTGGAAGG CAAGAACGGT GGCGTGGCCA TCCAGATGGC CATCGACGAC
TTCGGCGGCA AGGTGCTGGG CAAGCCCATC GAACTGCTCT CCGCCGACCA CCAGAACAAG
GCCGACATCG CTGCCAGCAA GGCGCGCGAG TGGATCGACA CGCAGAACCT GACCATGCTG
TTCGGTGGCA CCAACTCCGG CACTGCCCTG GCCATGGCCA AGGTGGCCGA AGAGAAGAAG
CGCGTGTACT TCAACAGCGG CGCCGGTTCC TCCGCGCTGA CCAACGACCA GTGCACGCCC
TACACGGTGC ACTATGCGTA CGACACCGTG GCACTGGCCA AGGGTACCGG CGGCGCCGTG
GTGAAGCAGG GCGGCAAGGA CTGGTTCTTC CTGACGGCCG ACTACGCCTT CGGCCAGGCG
CTGGAGAACG ACACCGCCAA GGTGGTCAAG GAAAACGGCG GCCGCGTGGT GGGCAACGTG
AAGCACCCGC TGAACGCGTC TGACTTCTCG TCCTTCCTGC TGCAGGCACA GAATTCCAAG
GCGCAGATCC TGGGCCTGGC CAACGCCGGC GGTGACACCA TCAACGCCAT CAAGGCGGCC
AAGGAATTCG GCATCAACAA GAACATGAAG CTGGCCGGCC TGCTGGTGTT CCTGACCGAC
ATCCACAGCC TGGGCCTGCG CAACACCGAA GGCCTGCTGC TGACCACCAG CTGGGACTGG
AACCTGAACG ACAAGACGCG TGAGTTCGGC AAGAAGTTCT TCGCCAAGAC CAAGCGCATG
CCCACGGACA TCCACGCGGC CGACTACTCC GCCACCATGA ACTACCTGAA GGCCGTGCAA
GCCGCCGGCA CTACCGATGC CGACAAGGTC ATGGAGAAGC TCAAGTCCAC GCCGATCGAC
GACTTCTACG CCAAGGGCAC GATCCGCGCC GACGGCCGCT TCGTGCACGA CATGTACCTC
ATGCAGGTGA AGTCGCCCTC CGAATCCAAG GAACCCTGGG ACTACTACAA GGTCGTGGCC
AAGCTGCCCG GCGACCAGGT GTTCACCACC AAGGCCGAGA GCAAGTGCGC CCTGTGGAAG
TGA
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| Protein sequence | MQKTLKTLVA VMGAAGLAVS AMQAHAQDKV KIGFITDMSS LYADVEGKNG GVAIQMAIDD
FGGKVLGKPI ELLSADHQNK ADIAASKARE WIDTQNLTML FGGTNSGTAL AMAKVAEEKK
RVYFNSGAGS SALTNDQCTP YTVHYAYDTV ALAKGTGGAV VKQGGKDWFF LTADYAFGQA
LENDTAKVVK ENGGRVVGNV KHPLNASDFS SFLLQAQNSK AQILGLANAG GDTINAIKAA
KEFGINKNMK LAGLLVFLTD IHSLGLRNTE GLLLTTSWDW NLNDKTREFG KKFFAKTKRM
PTDIHAADYS ATMNYLKAVQ AAGTTDADKV MEKLKSTPID DFYAKGTIRA DGRFVHDMYL
MQVKSPSESK EPWDYYKVVA KLPGDQVFTT KAESKCALWK
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