Gene Ajs_3115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3115 
Symbol 
ID4672743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3289848 
End bp3290939 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content71% 
IMG OID639840156 
Productpyridoxal-5'-phosphate-dependent enzyme, beta subunit 
Protein accessionYP_987316 
Protein GI121595420 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0031] Cysteine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.889891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGCCA TGTTGTCCCC CTCCTCTCTT TCCGCCCCGG CGGCCGGCAG CGGCTGGCTG 
CACGAGGCCA TCGCCCGCAT CGAGGCCGAC TACCAGCGCA GCGCCGACAC CCACCTGATC
CCGCTGCCGC TGCCCGCGTT CGCCGGCGCC GGCATCGACC TGTATTTGAA GGACGAATCC
ACCCATCCCA CGGGCAGCCT CAAGCACCGG TTGGCGCGCT CGCTGTTCCT GTATGCGCTA
TGCAATGGCT GGGTGCGCGA GGGCTCCACC ATCGTGGAGG CATCGAGCGG CTCCACCGCC
GTGAGCGAGG CCTATTTCGC GCGCCTGCTG GGCCTGCCCT TCGTGGCGGT GATGCCGCGC
AGCACCTCGG CCGAGAAGAT CGCGCTGATC GAGTTCTACG GCGGACGCTG CCACTTCGTG
GAGCGTGCGG GCGACGTGTA CGACGCTGCG CGCGCCATCG CCGCCGACAC GGGCGGCCAC
TACATGGACC AGTTCACCTA CGCCGAGCGC GCCACCGACT GGCGCGGCAA CAACAACATC
GCCGAGAGCA TGTTCACCCA GATGCAGCGC GAGCGCCACC CGGTGCCGCG CTGGATCGTG
GTGGGCGCAG GCACGGGCGG CACCAGCGCC ACCATCGGCC GCTACGTGCG CTACCAGCGC
CACGCCACGC AGGTGTGCGT GGCCGACCCG GCGGGCTCGG TGTTCAGCGC CTACCACCGC
ACGGGCGACG CCACGCTCAC CGCGCCGGGC TCGCGCATCG AAGGCATTGG CCGCCCGCGC
GTAGAGCCGA GCTTCATCCG CACGCTGGTG GACCGCATGG AAGAAGTGGC CGACGACGAC
TCCGTCGCCG CCATGCGCGT GCTGTCCACC CTGCTGGGGC GGCGCGTCGG CCCATCCACG
GGCACCAACT TCGTCGCCAT GCTGCGGCTG GCGCAGGAGA TGCGCACGCA GGGGCAGCGG
GGGTCGATCC TCTCGCTGCT GTGCGACGCG GGCGAGCGCT ACCTGCCCAC CTACCACGAC
GACGCCTGGG TGCAGCGCTG CCTGGGCGAC TGCGCGGCCG CGCACGGGCG GCTGCAGGCG
CTGCTGGCCT GA
 
Protein sequence
MRAMLSPSSL SAPAAGSGWL HEAIARIEAD YQRSADTHLI PLPLPAFAGA GIDLYLKDES 
THPTGSLKHR LARSLFLYAL CNGWVREGST IVEASSGSTA VSEAYFARLL GLPFVAVMPR
STSAEKIALI EFYGGRCHFV ERAGDVYDAA RAIAADTGGH YMDQFTYAER ATDWRGNNNI
AESMFTQMQR ERHPVPRWIV VGAGTGGTSA TIGRYVRYQR HATQVCVADP AGSVFSAYHR
TGDATLTAPG SRIEGIGRPR VEPSFIRTLV DRMEEVADDD SVAAMRVLST LLGRRVGPST
GTNFVAMLRL AQEMRTQGQR GSILSLLCDA GERYLPTYHD DAWVQRCLGD CAAAHGRLQA
LLA