Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3110 |
Symbol | |
ID | 4672391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 3283751 |
End bp | 3285007 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639840151 |
Product | Bcr/CflA subfamily drug resistance transporter |
Protein accession | YP_987311 |
Protein GI | 121595415 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGTCC CGTCCGCCGC CATCGGCCCG CAGCAGGCGC CTGCGGTACC CGTGCCTGTG CCTCCCGGCC TGGCCATCCT GGTGCTGGCC CTGCTGCTGA GCATCCAGCC CGTCACCACC GATCTGTACC TGCCCGCCCT GCCCGCGCTC ACGCGCAGCC TGAACGCACC CGTGGCCGCA GGCCAACTCA CGCTGTCCGC GCTGCTGCTG GCCTTTGGCT GCTCGCAACT GGCATGGGGG CCGCTGTCCG ACCGATTCGG CCGCCGGCCG GTGCTGCTCA CCGGGCTGGC GCTGTACACG CTGGCGGCGG TGGGTGCGGC GCTGGCGCCG TCCATGGCGG TGCTCATTGC CTGGCGCACG GCCCAGGGCG TGGCCATGGG TGCCGTGGTG ATGTGCGCGC GCGCCATCGT GCGCGACCTG TACACGCCGC TGGCGGGCGC ACGCGCCATG TCCAAGGCGC TGACCGGCTT GGGGCTCGTG GCCTGCCTGT GCGCGCCGCT GGGCGGGTTG CTGACCGAAT GGTTCAACTG GCGCGCGGCA CTGCTGGCGC TCACCGGCTA CGCCATGGGC ACGTTGGCGC TGGTGGCGCT GCGCATGCCC GAGACGCTGC ACCAGCGCAA CCCGCACGCC CTGCGCCCCG CCATGCTGGC AGGCACCGCG GCGCAGGTAT TGCGCACGCC CGCGTTCTGG GCGTTCTCGC TGCTCACCAC GGCCAGCTAT GGCGGGCTGT TCACCTTCCT GGCTGCTTCG TCCTTTGTCT ATCTCGACGT GCTGGGCATT TCGCGCACGC AGTACGGGCT GGCGCTGCTG TCCACGGCCG TGGCGTACCT GCTGGGCACG CTGCTGTGTC GGCGGCTGCT GGCGCGCCAG GGCCTCAAGC GCACGGTCGC CATCGCCGGC GCGCTGTCGG CCAGCGGCGG CCTGCTGATG TTGCTCGCCG CCGCGCTGGG CTGGCATAGC GTGGCCGCGC TGCTGCCGCC GTTCTACCTC TACATGGTGG GCCACGGCAT CCACCAGCCC TGTGGGCAGT CGGGCGCGGT GGGACCGTTC CCGCAGGCGG CGGGCATGGC CTCGGCACTC AATGGTTTCA TGATGATGCT GGCGGGCTTC GCCATCGGCC AGTGGCTGGG CGGGGCGCTG GACGGCAGCG TGTGGCCGCT GGTGCAAGGC GTGGCCCTGT GGTCGCTGCT GCTGGCCGCC ATTGCCTGGA CGCTGGTGCA GCGCCATGCC CCGCAGGAGG TTACCCATGC CCGCTGA
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Protein sequence | MSVPSAAIGP QQAPAVPVPV PPGLAILVLA LLLSIQPVTT DLYLPALPAL TRSLNAPVAA GQLTLSALLL AFGCSQLAWG PLSDRFGRRP VLLTGLALYT LAAVGAALAP SMAVLIAWRT AQGVAMGAVV MCARAIVRDL YTPLAGARAM SKALTGLGLV ACLCAPLGGL LTEWFNWRAA LLALTGYAMG TLALVALRMP ETLHQRNPHA LRPAMLAGTA AQVLRTPAFW AFSLLTTASY GGLFTFLAAS SFVYLDVLGI SRTQYGLALL STAVAYLLGT LLCRRLLARQ GLKRTVAIAG ALSASGGLLM LLAAALGWHS VAALLPPFYL YMVGHGIHQP CGQSGAVGPF PQAAGMASAL NGFMMMLAGF AIGQWLGGAL DGSVWPLVQG VALWSLLLAA IAWTLVQRHA PQEVTHAR
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