| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3090 |
|---|
| Symbol | |
|---|
| ID | 4671700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 3261069 |
|---|
| End bp | 3261629 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639840135 |
|---|
| Product | Rieske (2Fe-2S) domain-containing protein |
|---|
| Protein accession | YP_987295 |
|---|
| Protein GI | 121595399 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAC CCCAACGATT AAAACCCGTG TTTCCCCAAG ATCCGAAATG GCCGGGCGAA
GGTAGCAGCC GCGTTCCCTT CTGGGCCTAC ACCCGCGAAG ACCTGTACAA GCGCGAATTG
GAGCGCCTGT TCTATGCAAA CCACTGGTGC TATGTAGGCC TGGAAGCCGA GATTCCGAAT
CCAGGCGACT TCAAGCGAAC GGTGATCGGT GAGCGCTCGG TCATCATGGT GCGTGATCCG
GATGGCGGCA TCAACGTGGT GGAGAACGTC TGCGCCCACT GTGGCATGCG CTTTTGCCGC
GAGCGCCACG GCAACGCCAA GGACTTCTTC TGCCCCTACC ACCAGTGGAA CTACAGCCTC
AAGGGTGACC TGCAGGGCGT GCCCTTCCGC CGTGGCGTCA AGCAGGACGG CAAGGTCAAC
GGCGGCATGC CCAAGGACTT CAAACTCGAA GAACACGGCC TGACCAAGCT CAAGGTGGCC
GCCCGAGGCG GTGCAGTGTT TGCCTCTTTC GACCACGATG TCGAGCCTTT CGAGGACTGT
GCGTGTACGA CAGCGAGATG A
|
|---|
| Protein sequence | MSEPQRLKPV FPQDPKWPGE GSSRVPFWAY TREDLYKREL ERLFYANHWC YVGLEAEIPN
PGDFKRTVIG ERSVIMVRDP DGGINVVENV CAHCGMRFCR ERHGNAKDFF CPYHQWNYSL
KGDLQGVPFR RGVKQDGKVN GGMPKDFKLE EHGLTKLKVA ARGGAVFASF DHDVEPFEDC
ACTTAR
|
|---|
| |