Gene Ajs_3089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3089 
Symbol 
ID4671697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3260037 
End bp3261023 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content61% 
IMG OID639840134 
Productoxidoreductase FAD-binding subunit 
Protein accessionYP_987294 
Protein GI121595398 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
[COG0633] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGG TAGTAGAACC CCTCAATTTG CATCTGAACG CGGAGACCGG CAGCACCCTG 
CTTGACGTGC TCAGGTCCAA CGAGGTCCCC ATTTCTTATA GCTGCATGTC GGGCCGCTGC
GGCACTTGCC GTTGCCGTGT GATTGCCGGC CATCTTCGCG ATAACGGCTC CGAGACAGGG
CGCCCGCAGG CAGGAAAGGG GGCCTATGTC CTGGCCTGTC AGGCGGTTCT GACCGAAGAC
TGCACGATCG AGATTCCTGA ATCTGACGAG ATCGTGGTTC ACCCGGCGCG CATCGTCAAG
GGGACGGTCA CAGCGATAGA CGAAGCCACC CATGACATCC GGCGCCTGCG CATCAAACTG
GCCAAACCGC TTGAGTTCAG CCCTGGCCAG TACGCAACGG TGCAGTTCAC GCCCGAATGC
GTCCGCCCCT ATTCGATGGC CGGGCTGCCT AGCGATGCGG AAATGGAGTT TCAGATTCGC
GCGGTTCCGG GCGGGCATGT CAGCAACTAC GTTTTCAATG AACTGTCCGT AGGCGCTTCG
GTGCGGATCA GCGGCCCCCT CGGAACGGCC TATCTGCGGC GCACGCACAC CGGCCCCATG
CTTTGTGTGG GGGGTGGAAC AGGTCTGGCG CCCGTCCTTT CGATCGTTCG AGGCGCACTG
GAAAGCGGGA TGAGCAACCC CATCCATCTG TACTTCGGTG TGCGGAGCGA GCAGGACATC
TATGACGAGG AACGCCTTCA CGCATTGGCT GCAAGGTTTC CGAATCTCAA GGTGAATGTC
GTTGTTGCAA CAGGCCCTGC CGGCCCTGGT CATCGATCCG GCCTGGTCAC CGATCTGATC
GGCCGTGACT TGCCCAATTT GGCGGGATGG CGCGCCTACC TGTGTGGCGC TCCGGCCATG
GTCGAGGCCC TGAACCTGCT CGTTGCTCGC CTAGGCATAG TACCCGGGCA CATCCATGCC
GATGCGTTCT ATCCCAGCGG CGTCTGA
 
Protein sequence
MELVVEPLNL HLNAETGSTL LDVLRSNEVP ISYSCMSGRC GTCRCRVIAG HLRDNGSETG 
RPQAGKGAYV LACQAVLTED CTIEIPESDE IVVHPARIVK GTVTAIDEAT HDIRRLRIKL
AKPLEFSPGQ YATVQFTPEC VRPYSMAGLP SDAEMEFQIR AVPGGHVSNY VFNELSVGAS
VRISGPLGTA YLRRTHTGPM LCVGGGTGLA PVLSIVRGAL ESGMSNPIHL YFGVRSEQDI
YDEERLHALA ARFPNLKVNV VVATGPAGPG HRSGLVTDLI GRDLPNLAGW RAYLCGAPAM
VEALNLLVAR LGIVPGHIHA DAFYPSGV