Gene Ajs_3060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3060 
Symbol 
ID4670730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3228440 
End bp3229213 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content71% 
IMG OID639840106 
Producthypothetical protein 
Protein accessionYP_987266 
Protein GI121595370 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.730904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.217511 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTCT TTCCCCTGAG TTTCTCCCGG CATCGCCTCT GGCTATGCAC GGCGGTCCTG 
CTGGCCTCGG TCGCGTCCGC CGCGGAACCA CCGGGCACAG CGCCGCCGGC ACGCGACGCC
GAGGCCAAGG TCTACCCGAC CCGCATCGCG CGCTCCTTCA CCGTGCTCTA CCAGATGCAG
CGCGGCGGCA TCCGGGGCAG CGGCGAGTTC GTCTGGAAGC GCACGGGCGA TGCCTACGAG
GCGCACCTCA AGGGCACGGT CGCCGGCCTG GCGCTCATCA ACTGGGCCAG CCAGGGCGGC
TTCGACGCCG CGGGCGTGGC CCCCGGCAGC TATGTGGAGA AGCGTTTGGG CAAGTCCGTG
CGGGAGGCCA CCTTCGTGCG CAGCGAATCG AGGATCGATT TCTCGGGCTC GGCCCCCGAC
ATCCCGCTGG TGCCTGGCGC ACAGGACCGC GTGAGCTGGC TGGTGCAACT GCAGGCCATC
CTGACGGCGG ACCCGGCCAA TGCGAAGGCT GGCGAGCGGG TCGTTATGCC GGTGGTGGGC
GTGCGCGGCC GAGCCGAAAC ATGGATCTTC GAAGCGGCGG GTGCCGAGAC GATCAAGACC
CCCGCGGGCG ACCTGCGGAC CCAGAAGCTG ACACGCGTGC TGCGCCAGCC CGACGACACG
CGGGCCGAGG TCTGGGTCGA GCCGGCGCGG CAGTTCCTGC CGGTGCGCAT CCGCCTCACG
CTGCCGCCCT TCGACGCGCC GCTCGACATG ACGCTGGCCG ACGTCAGCGG GTAA
 
Protein sequence
MSFFPLSFSR HRLWLCTAVL LASVASAAEP PGTAPPARDA EAKVYPTRIA RSFTVLYQMQ 
RGGIRGSGEF VWKRTGDAYE AHLKGTVAGL ALINWASQGG FDAAGVAPGS YVEKRLGKSV
REATFVRSES RIDFSGSAPD IPLVPGAQDR VSWLVQLQAI LTADPANAKA GERVVMPVVG
VRGRAETWIF EAAGAETIKT PAGDLRTQKL TRVLRQPDDT RAEVWVEPAR QFLPVRIRLT
LPPFDAPLDM TLADVSG