| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3052 |
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| Symbol | |
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| ID | 4670599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3220651 |
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| End bp | 3222165 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639840099 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_987259 |
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| Protein GI | 121595363 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4584] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.96491 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATGA TTGGCAAGGT CCTGCGGATG CACCACCGCG AGAACAAATC GGTGCGAGAG
ATCGCGAGGG CGACGAGCCT GTCGCGCAAC ACGGTGAGGA AGTACCTGCG CGTGCCGGTG
GCGCAGCCAC CGAAGTACGT GCGCCGAGCG GCCTCGACGA AGCTGACGCC GTTCGTCGAG
ATGGTGAAGA TGGCGTTGTT GGCCGACGCG CGTCGCCCGA GGAAGGAGCG GCGAACCGCG
CGAGCGCTGC TGCAGCAGAT TGCGGCGGCC GGCTATGAAG GCGGCTACAC CCAGCTGACC
GACTTCATCC GCGCTTGGAG AGCGCAGCAA GGAGGTGTCG CAGTCGGCAA GGCATTCGTG
CCGCTCGCCT TCGAGCTGGG CGAGGCGTTC CAGTTCGATT GGAGCGATGA GGCGCTGGTG
ATCGGCGGGA TCTACCGCAA GCTGCAGGTT GCGCACATGA AACTGTGCGC GAGCCGCGCG
TTCTTCCTTG TGGCGTATCC GGGCCAGGGG CACGAGATGC TGTTCGATGC CCACACCCGG
TCCTTCGCGG CGCTGGGCGG GGTGGCGCGT CGCGGGATCT ACGACAACAT GCGCACGGCC
GTGGACAAGG TCCACAAGGG CAAGGGCCGC ACCGTCAACG CCCGCTTCTC GGTGATGTGC
GCGCACTATC TGTACGACCC CGACTTCTGC AACGTCGCCT CGGGCTGGGA GAAGGGGGTG
GTGGAGAAGA ACGTGCAGGA CAGCCGCCGG CGCATCTGGA TCGACGCGCG TGAGCGGCGC
TTCGCCAGCT TCGACGAGCT CAACGCCTGG CTGGGCGAGC GCTGCCGGGC GCTGTGGGAG
GAGATCAGGC ATCCCGAACA CAAGCAGTTC AGCGTGGCTG AGGTGCTCGA GCACGAACGG
GTGCAGTTGA TGCCGATGCC CGCCGCCTTC GACGGCTACG TCGAGAAGGT GGCACGGGTG
AGCAGCACCT GCCTGGTGTC GGTGGCGCGC AATCGCTACT CGGTGCCATG CGAGCTGGCC
GGGCAGATGG TCAGTTCGCA CCTGTATCCG ACGCGCGTAA CGGTGGTGGC CGGCGACGTG
GTCGTGGCCG AGCACGAGCG GCTCACGGAC AAGGGCAAGA CGCTCTACGA CTGGCAGCAC
TACATTCCGT TGGTGCAGAG GAAGCCGGGG GCGTTGCGCA ATGGAGCGCC GTTCACGGAT
CTGCCGGAAT CATTGCAGCG GCTGCGCCGG GGGCTGTTGC GCGAGAGCGG CGGCGACCGC
CTGATGGCGC GGGTTCTAGC CCTGGTGCCG ACGGCGGGAC TGGAGGCGGT GCTGGTGGCC
GTGGAGTTGG CGTTGGACGG CGCGCCGCCG TCGGGGCGCG TGAGCGTCGA GCACGTCATC
AACGTGCTGG CGCGTCTGAA CGCTGCGCCG AGGCCGGCCA ACGTGCAAAC TTCGCTGCAG
GTGCTGACGC CGCCGATCGC CGATACGGCT CGCTACGACC GGCTGCGCGA CATCCAGGAG
ACCGGCCATG CGTGA
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| Protein sequence | MAMIGKVLRM HHRENKSVRE IARATSLSRN TVRKYLRVPV AQPPKYVRRA ASTKLTPFVE
MVKMALLADA RRPRKERRTA RALLQQIAAA GYEGGYTQLT DFIRAWRAQQ GGVAVGKAFV
PLAFELGEAF QFDWSDEALV IGGIYRKLQV AHMKLCASRA FFLVAYPGQG HEMLFDAHTR
SFAALGGVAR RGIYDNMRTA VDKVHKGKGR TVNARFSVMC AHYLYDPDFC NVASGWEKGV
VEKNVQDSRR RIWIDARERR FASFDELNAW LGERCRALWE EIRHPEHKQF SVAEVLEHER
VQLMPMPAAF DGYVEKVARV SSTCLVSVAR NRYSVPCELA GQMVSSHLYP TRVTVVAGDV
VVAEHERLTD KGKTLYDWQH YIPLVQRKPG ALRNGAPFTD LPESLQRLRR GLLRESGGDR
LMARVLALVP TAGLEAVLVA VELALDGAPP SGRVSVEHVI NVLARLNAAP RPANVQTSLQ
VLTPPIADTA RYDRLRDIQE TGHA
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