Gene Ajs_2996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2996 
Symbol 
ID4674652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3162923 
End bp3163315 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content65% 
IMG OID639840047 
ProductUspA domain-containing protein 
Protein accessionYP_987207 
Protein GI121595311 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.415336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.638683 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTC TCGTCGCCTA CGTTCCACGC CCCGAAGGCC GGGCCGCGCT GGACAAGGGC 
ATCGAAATCG CCACCCGTCG CAATGAACGC CTGGTCGTCG TCAACGCCGG CCCCGGCGGG
CGCCAGGAAG ACCCCAGCAT CGTCAACGGC TACGAGGCCG AACGTGTGGA GGAGCGCCTG
GCCACGCTGC CGATCGAGGC CGAGTTCAAG CAGTTCGTGC GCGGCAAGAG CACCATCGAG
GAGATCGAGG AAATGGTCGC GGCGCTGCAG GTATCCGTGC TGGTGATCGG CCTGCGCAAA
CGCTCGCCCG TCGGCAAGCT GCTGCTGGGC AGCATGGCAC AGGAGATCTT GCTCAACGTC
GATTGCCCGG TATTGGCCGT CAAGGCCGCT TAA
 
Protein sequence
MTILVAYVPR PEGRAALDKG IEIATRRNER LVVVNAGPGG RQEDPSIVNG YEAERVEERL 
ATLPIEAEFK QFVRGKSTIE EIEEMVAALQ VSVLVIGLRK RSPVGKLLLG SMAQEILLNV
DCPVLAVKAA