Gene Ajs_2995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2995 
Symbol 
ID4674546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3161620 
End bp3162699 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content69% 
IMG OID639840046 
Producthypothetical protein 
Protein accessionYP_987206 
Protein GI121595310 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.530131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.530889 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCGG GTCAGCCGCC GCAAGGCTCC GCCGCCACGC CTGCCGCCCT GAGGCCGCCA 
TTCGCGCCCG CCACGCGGGG CGTGGTGATC GCCAGCTACG TGCTGATGGG CGCCGCGCTG
CTGCTGGTGA TGCTGCGCGG GCTGCTGCCC GGGCTGCTGT GCGTGTGCCT GGGTTTTCTG
CTCACGCGTT GGCTGGCGCC ACGCTTGGCG TGGTTCCCGT CGCGCACGGC GAACAGCATG
GCAACCCGCG GCCAGACGGC AGCCGCCACG CTGGTCATGC TGTCCCCCTT GCTGCTGCTG
GCGCTGGCGC TGTCGCATTC GCGCACCTAT ATCGTCGACG CCCCCCAGCA ATACCGCGAA
CTGCTGGACT TCCTGGCCCG CACCGTGCTG GAACTGCGGC TGAAGCTGCC CACCGACATC
GCGGCCCAGT TGCCCGAAGG CGCCGCCGAG ATCCAACGCA CCATCGCCGC CTATCTGGCC
GCCAAGGCCG GCGCCCTGGC CATGGCGGGG CGCGCCTGGC TCACGGGCCT GCTGTATGCC
TATGTGGGCC TGCTGATTGG GGCACTGGCC GCCGTGCGCA GCGTGGGCGC TTCACGCGGC
CCCTTGGCAC AAGAGCTGGT GCTGCGCATC GCGCGTATGG GAGAGGCCTT CCGTCAGATC
GTCGCGGCGC AGTTCTGGAT TGCCGCCTTC AACACGCTGC TCACCGCACT GTTCCTGTTG
CTGGTGCTGC CCCTGTGGGA CTTGGACCTG CCCTACACCC CCGCTTTGAT CACCCTGACC
TTCGTGGCCG GCCTGGTGCC CATCGTGGGC AACCTGCTGT GCAACGCGGT CATCACGCTG
GTGGGGCTGT CGGTATCGCC CGTTGCGGCC GTGGCCTGCC TGGCCTTCCT GATCCTGATC
CACAAGGCCG AGTACGTGAT CAACGCCAAG GTCGTGGGGC GGCGCACCCA CATGGGCGTG
TGGGAGCTGC TGTCGGTGAT GTTCGTGGCC GAAGCCGTCT TCGGCCCTGC GGGGCTGGTG
GCGGCACCGC TGTTCTACGC CTACCTGAAG AAAGAGCTGG AAGCCGCGCG GCTGGTATAA
 
Protein sequence
MPSGQPPQGS AATPAALRPP FAPATRGVVI ASYVLMGAAL LLVMLRGLLP GLLCVCLGFL 
LTRWLAPRLA WFPSRTANSM ATRGQTAAAT LVMLSPLLLL ALALSHSRTY IVDAPQQYRE
LLDFLARTVL ELRLKLPTDI AAQLPEGAAE IQRTIAAYLA AKAGALAMAG RAWLTGLLYA
YVGLLIGALA AVRSVGASRG PLAQELVLRI ARMGEAFRQI VAAQFWIAAF NTLLTALFLL
LVLPLWDLDL PYTPALITLT FVAGLVPIVG NLLCNAVITL VGLSVSPVAA VACLAFLILI
HKAEYVINAK VVGRRTHMGV WELLSVMFVA EAVFGPAGLV AAPLFYAYLK KELEAARLV