Gene Ajs_2973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2973 
Symbol 
ID4672788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand+ 
Start bp3140809 
End bp3141417 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content67% 
IMG OID639840025 
ProductLipocalin family protein 
Protein accessionYP_987185 
Protein GI121595289 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3040] Bacterial lipocalin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.190795 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.513308 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCTGC TCTCGGCTTT TCTATTTTCT GTGCGGCGTG CACTCATCCC GTCCTGCCGC 
GCAGGCCTGT GGGCCCTGTG GATGGCGGGC GTCGCCGCAA TGGCCGGCTG TGCAAACACC 
AGCCCCCCGC CGGGCGTAGA AGCGGTCACG CCATTCGATC TACAGCGCTA TCAGGGGCGC 
TGGTATGAGC TGGCCCGGCT CGACCACTCA TTCGAGCGCG GCATGACGGA TGTGTCCGCC 
ACCTACACCC CCCAGGCGGA TGGCAGCGTG CGCGTGGTCA ACCGCGGGTT TGCCGCCGCA 
TCGGGCCAAT GGCGCGAAGC CATTGGCAGG GCGCTGTTCA CGGGTGCCCC CACCACCGGA 
TCGCTCAAGG TGTCCTTCTT CGGCCCGTTC TACGGCGGCT ACCACGTCGC GGCGCTTGAC 
CCTGACTACC GCTGGGCGCT GGTGTTGGGG CCTGATACCA GCTACTGCTG GATTCTGGCG 
CGCGACAAAC AACTGGACGC TGCGCAGCGC GATGCCATCG TGGCTCGCGC CCAGGCGCTG 
GGGGTGGATA CGCACGCCCT CATATGGGTC ACGCACAAGC GCCAGGATCC TGCGCAGCCG 
CCCCATTGA
 
Protein sequence
MYLLSAFLFS VRRALIPSCR AGLWALWMAG VAAMAGCANT SPPPGVEAVT PFDLQRYQGR 
WYELARLDHS FERGMTDVSA TYTPQADGSV RVVNRGFAAA SGQWREAIGR ALFTGAPTTG 
SLKVSFFGPF YGGYHVAALD PDYRWALVLG PDTSYCWILA RDKQLDAAQR DAIVARAQAL 
GVDTHALIWV THKRQDPAQP PH