| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2972 |
|---|
| Symbol | |
|---|
| ID | 4672031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 3139833 |
|---|
| End bp | 3140783 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639840024 |
|---|
| Product | MerR family transcriptional regulator |
|---|
| Protein accession | YP_987184 |
|---|
| Protein GI | 121595288 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0234999 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.559596 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGC CAGACCATCC CGAGAGCGCA GGTTTGCCCA TCGCGGCCGT GGAGCGCGAA
ACCGGCGTAG CCAAGGACAC CTTGCGCGTA TGGGAAAAAC GCTATGGCTT CCCGCAACCC
TTGCGCGACG GGGCGGGGGA CCGCCTGTAT CCGAGCGAGC AGGTGCAACG GCTGAAACTG
ATTCGCCGCC TGCTCGACAC AGGGGCCAGG CCCGGCAAGG TGGTGGGGTT GGACAGTGCA
GAACTGCTGT CCTTGCTGAA CCAGAGACCT TCATCCCCCA GTTCAGTTTT GTCCAAGACA
AATCTTCAGG CGTTCTCCTC ACCTGCGACC CTGACTCCGC TTCTTGACGC CATCGGAGCG
CACGATCCGC AAGCCCTGCG GCATGCCCTG AGTCACGCAC AGCTGCGCAT GGGGTTCGCT
CCGTTCGTCA CCGACCTGGT GGCTCCCCTG ACCACGGCCG TGGGCGAGGC CTGGGTGCAA
GGGCGCTTCG AGGTCTTCGA GGAACACCTC TTCACCGAGG TCATCACCGG GGTTCTGCGC
AACGCCATTG CTTCCCTGGC GCCGCTGCCC ATACCGCAAG GTCCCAAGGT CCTGCTCACC
ACGCTACCCC AGGAATTGCA TAGCCTAGGG TTGCTCATGG TTGAAGCACT GCTGGCACTG
GAGGGCTGTA CCTGTGTTTC GCTGGGTACG CAGACACCCG TGGGCGACGT GGCCCAAGCC
GCCGTGGCCC ATCGGGCGGA TGTGGTGGCT TTGAGCTTCA GCAATGTGCA TAACGGGACA
GTCGTTCAGG CCAGCCTGCG TGAGTTGCGG GCCCAGTTGT CTCCCACCAC CGCGTTGTGG
GTCGGCGGCT CGTGCACGGC TCTGTACCAG AAGCCCCTGG AAGGGATCAC TCCCGTCCAG
CACCTGACGG GGCTTCAACC CCTGGTGGCG CAATGGCGCC ACACACACTG A
|
|---|
| Protein sequence | MSTPDHPESA GLPIAAVERE TGVAKDTLRV WEKRYGFPQP LRDGAGDRLY PSEQVQRLKL
IRRLLDTGAR PGKVVGLDSA ELLSLLNQRP SSPSSVLSKT NLQAFSSPAT LTPLLDAIGA
HDPQALRHAL SHAQLRMGFA PFVTDLVAPL TTAVGEAWVQ GRFEVFEEHL FTEVITGVLR
NAIASLAPLP IPQGPKVLLT TLPQELHSLG LLMVEALLAL EGCTCVSLGT QTPVGDVAQA
AVAHRADVVA LSFSNVHNGT VVQASLRELR AQLSPTTALW VGGSCTALYQ KPLEGITPVQ
HLTGLQPLVA QWRHTH
|
|---|
| |