Gene Ajs_2966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2966 
Symbol 
ID4672096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3132630 
End bp3133949 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content69% 
IMG OID639840018 
Productmajor facilitator superfamily transporter 
Protein accessionYP_987178 
Protein GI121595282 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2211] Na+/melibiose symporter and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.274258 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCGC TGGCTACCCC TGCGCGTGCG GTTCCGCTGC CCCGTTGGTG GTCCGGGCCG 
GCCTATGGCC TGCTCGGTCT GCCGCTGGCC TTTGTGGCCT TGCCGCTGTA TGTGGTGTTA
CCGCATTACT ACGCCACGGA ATTGGCTTTG CCGTTGGCCA ACGTGGGTGC TTTGCTGATG
CTGGTGCGTC TGCTGGATGC GGCCGCCGAG CCCCTGCTGG GGCGCTTGAG CGACCGCCTG
TACCAGGGCA CGCTGCATGC GGTCCTGTGG GTGGCGGGGG GCTCGGCCTT GGTGCAGGTG
CTGGGGCTGT CGGGGCTGTT CTTTCCCGCG GTGCAAGGAC CGCAGGCGTT GGCGGCGTGG
ATGGTGGCGG GGTTGTTGCT GACCTGCCTG GCGCACAGCC AGTTGGTGAT TGCGCACCAG
GCCTGGGGCG TGCGTCTGGG CGGCGACGCG CTGCAGCGTA GCCGTGTCGT GGCCTGGCGC
GAAGGTCCGG GGCTGATCGG CGTGGTCACG GCCAGTGCGT TGTCGGTGGC CTGGGGCGCC
GGGCCCATGC TGGTGGTGTT CGCGCTGAGC TTGCTGGCCG GGTGGCTGGC CCTGTGGCAC
GCCCCACGCC CTGCAGCGCC TGCGCAGCAG GACTTGCCTG CTGCCTTTGC CTGGGCCACG
GTCTGGCAAC CCTTGCGCCA GCCGGCCTTT CGCCGCTTGT TGGCGGTGTT TTTGTGCAAC
GGCATTGCCA GCGCAGTTCC GGCGGCGTTG ATGCTGTTTT TTGCCCGGGA CCGGCTGCAG
GCCACACAGG CGCAGATTGC CTTGTTTCTG GTGCTGTACT TTGTCAGCGG GGCGCTGTCC
ATGCCAGGGT GGTTGCGCGC GGTGCGCCGC TGGGGGCTGG AGCGCGCCTG GCTGGGCGGC
ATGCTGCTGG CGGTGGCCTG TTTTGGCTGG ACGACGCTTC TGGGCAGCGG GCAGATTGCG
GCCTTTGCGT GGATCTGTGC GTTGTCCGGT ATCGCCTTGG GGGCGGATCT GGCCTTGCCC
GGGGCTTTGC TGGCGCGCTT GGTGGAACGC CAGGGGGCTC AGGGGCGCAG CGAAGGGGCG
TACCTGGGGT GGTGGAACCT GGCCACCAAA CTGAATCTGG CCCTGGCCGC AGGCGCGGCG
CTGCCGTTGC TGCAGTGGCT CGGCTACAGC CCCGGCATCC AGGACGCCCA CGCGCTGCAG
CGCCTCGCTT GGGCTTACGC GCTGCTGCCT TGCGCCCTCA AGCTTCTGGC GGCAGGTTTG
CTGTACCGCC TGCTGATCCA CCCCTCCCCG CCGTTGCATG ACCAAGGAGT TTCCCCATGA
 
Protein sequence
MTPLATPARA VPLPRWWSGP AYGLLGLPLA FVALPLYVVL PHYYATELAL PLANVGALLM 
LVRLLDAAAE PLLGRLSDRL YQGTLHAVLW VAGGSALVQV LGLSGLFFPA VQGPQALAAW
MVAGLLLTCL AHSQLVIAHQ AWGVRLGGDA LQRSRVVAWR EGPGLIGVVT ASALSVAWGA
GPMLVVFALS LLAGWLALWH APRPAAPAQQ DLPAAFAWAT VWQPLRQPAF RRLLAVFLCN
GIASAVPAAL MLFFARDRLQ ATQAQIALFL VLYFVSGALS MPGWLRAVRR WGLERAWLGG
MLLAVACFGW TTLLGSGQIA AFAWICALSG IALGADLALP GALLARLVER QGAQGRSEGA
YLGWWNLATK LNLALAAGAA LPLLQWLGYS PGIQDAHALQ RLAWAYALLP CALKLLAAGL
LYRLLIHPSP PLHDQGVSP