Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2966 |
Symbol | |
ID | 4672096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3132630 |
End bp | 3133949 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639840018 |
Product | major facilitator superfamily transporter |
Protein accession | YP_987178 |
Protein GI | 121595282 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.274258 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCCGC TGGCTACCCC TGCGCGTGCG GTTCCGCTGC CCCGTTGGTG GTCCGGGCCG GCCTATGGCC TGCTCGGTCT GCCGCTGGCC TTTGTGGCCT TGCCGCTGTA TGTGGTGTTA CCGCATTACT ACGCCACGGA ATTGGCTTTG CCGTTGGCCA ACGTGGGTGC TTTGCTGATG CTGGTGCGTC TGCTGGATGC GGCCGCCGAG CCCCTGCTGG GGCGCTTGAG CGACCGCCTG TACCAGGGCA CGCTGCATGC GGTCCTGTGG GTGGCGGGGG GCTCGGCCTT GGTGCAGGTG CTGGGGCTGT CGGGGCTGTT CTTTCCCGCG GTGCAAGGAC CGCAGGCGTT GGCGGCGTGG ATGGTGGCGG GGTTGTTGCT GACCTGCCTG GCGCACAGCC AGTTGGTGAT TGCGCACCAG GCCTGGGGCG TGCGTCTGGG CGGCGACGCG CTGCAGCGTA GCCGTGTCGT GGCCTGGCGC GAAGGTCCGG GGCTGATCGG CGTGGTCACG GCCAGTGCGT TGTCGGTGGC CTGGGGCGCC GGGCCCATGC TGGTGGTGTT CGCGCTGAGC TTGCTGGCCG GGTGGCTGGC CCTGTGGCAC GCCCCACGCC CTGCAGCGCC TGCGCAGCAG GACTTGCCTG CTGCCTTTGC CTGGGCCACG GTCTGGCAAC CCTTGCGCCA GCCGGCCTTT CGCCGCTTGT TGGCGGTGTT TTTGTGCAAC GGCATTGCCA GCGCAGTTCC GGCGGCGTTG ATGCTGTTTT TTGCCCGGGA CCGGCTGCAG GCCACACAGG CGCAGATTGC CTTGTTTCTG GTGCTGTACT TTGTCAGCGG GGCGCTGTCC ATGCCAGGGT GGTTGCGCGC GGTGCGCCGC TGGGGGCTGG AGCGCGCCTG GCTGGGCGGC ATGCTGCTGG CGGTGGCCTG TTTTGGCTGG ACGACGCTTC TGGGCAGCGG GCAGATTGCG GCCTTTGCGT GGATCTGTGC GTTGTCCGGT ATCGCCTTGG GGGCGGATCT GGCCTTGCCC GGGGCTTTGC TGGCGCGCTT GGTGGAACGC CAGGGGGCTC AGGGGCGCAG CGAAGGGGCG TACCTGGGGT GGTGGAACCT GGCCACCAAA CTGAATCTGG CCCTGGCCGC AGGCGCGGCG CTGCCGTTGC TGCAGTGGCT CGGCTACAGC CCCGGCATCC AGGACGCCCA CGCGCTGCAG CGCCTCGCTT GGGCTTACGC GCTGCTGCCT TGCGCCCTCA AGCTTCTGGC GGCAGGTTTG CTGTACCGCC TGCTGATCCA CCCCTCCCCG CCGTTGCATG ACCAAGGAGT TTCCCCATGA
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Protein sequence | MTPLATPARA VPLPRWWSGP AYGLLGLPLA FVALPLYVVL PHYYATELAL PLANVGALLM LVRLLDAAAE PLLGRLSDRL YQGTLHAVLW VAGGSALVQV LGLSGLFFPA VQGPQALAAW MVAGLLLTCL AHSQLVIAHQ AWGVRLGGDA LQRSRVVAWR EGPGLIGVVT ASALSVAWGA GPMLVVFALS LLAGWLALWH APRPAAPAQQ DLPAAFAWAT VWQPLRQPAF RRLLAVFLCN GIASAVPAAL MLFFARDRLQ ATQAQIALFL VLYFVSGALS MPGWLRAVRR WGLERAWLGG MLLAVACFGW TTLLGSGQIA AFAWICALSG IALGADLALP GALLARLVER QGAQGRSEGA YLGWWNLATK LNLALAAGAA LPLLQWLGYS PGIQDAHALQ RLAWAYALLP CALKLLAAGL LYRLLIHPSP PLHDQGVSP
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