Gene Ajs_2962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2962 
Symbol 
ID4671466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3130256 
End bp3130564 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content59% 
IMG OID639840014 
ProductRNP-1 like RNA-binding protein 
Protein accessionYP_987174 
Protein GI121595278 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.177581 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.715358 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACC GACTGTACGT GGGCAACTTG GCCTATTCCG TGCGTGATGA ATCGCTGCAC 
CAGCAGTTTT CCCAATTTGG TTCCGTCACC TCCGCCAAGG TGATGATGGA GCGCGATACA
GGCCGATCCA AGGGCTTCGG CTTTGTAGAA ATGGGCAGCG ATTCCGAGGC ACAGGATGCC
ATTAACGGTC TGAACGGCCG TTCTGTCGAT GGACGTGCAC TGACGGTCAA CGTCGCGCGT
CCCATGGAAG CTCGCCCAAG TTTTGGCGGC GGCGCAGACC GTGGTGGCTA CCGCGGTGGC
CGCTACTGA
 
Protein sequence
MNNRLYVGNL AYSVRDESLH QQFSQFGSVT SAKVMMERDT GRSKGFGFVE MGSDSEAQDA 
INGLNGRSVD GRALTVNVAR PMEARPSFGG GADRGGYRGG RY