Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2959 |
Symbol | |
ID | 4671584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3127686 |
End bp | 3129020 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639840011 |
Product | phage integrase family protein |
Protein accession | YP_987171 |
Protein GI | 121595275 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0924112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.542634 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGTCA CCAAGCTCAC CAAGTCGATC GTCGATGCGG CGCAACCCAG CGACAAGGAC TATGAATTGA GGGACACGAT TGTCCCCGGG TTCCTGTGCA AGGTCACGGC GTCGGGCCGC AAGATCTTCA TGCTGCACTA CCGCACGAAT TCGGGCGAAC GCCGCAAGCC GAGGATCGGC CGGTTCGGTG AACTGACCGT CGAGCAGGCG CGCTCGATCG CGCAGGACTG GATGGCCGAC GTGCGCAAGG GCAGCGACCC CAGCGCAGCC AAGCAGGCGG CACGCCAAGC CCCCACGGTC AAGGAGCTGT GCACGCAGTT CATCGAGGAG TATTCCAAGA CGCGCAACAA GCCCAGTACG GTCGCTACCT ACCAAGACCA CATCAATCGG TACATCGTGC CCAAGCTGGG CAAGATCAAA GTGCCGGAGC TGACCCGCGT GGATGTGGCA GAGGTGATGC GGGACATGGC CAAGATCTCC TCCACGGCCA ATCGGACTCT GGCCTGTCTG CGCAAGATGT TCAACATGGC CGAGGTCTGG GGCTACCGAC CCGATGGCTC CAATCCGTGC CGCCATGTGC CGAAGTACCG GGAAAACGGT GAGACGAGGT ACATCACCGA CGAGGAACTG GCGCGCCTCT ACGCCTATCT GGACCGTGCG GATGCCGAGG GGTTGGAACA CCCCACGCTG ACGCTGGCGA TTCGCCTGCA GTTCGAGTTC TCGGCACGCA TGTCGGAAAT CCGAACGCTT CAATGGGCCT GGATCGACTT CGAGAACCGC CGGGTGGCCT GGCCGGACAG CAAGACCGGT GGCATTTCCA AGCCGATGAG CGAGGTGGCG CACCAGTTGC TCTCCAACGC CGAGCGCATT GAAGATTCGC CCTACGTGTG CCCCAGCATA TATGACGGCA ACCTTCCGCT GCCCAGTGGG ACCTACTACA ACTCCTGGCG GCGAATCCTT CTGCGTGCGA AGGTGCCCCA TGTCGGCACG CATGGCATTC GCCACCGCGC CGCTACCGAC ATCGCGAATT CCGGTGTTCC CCTGAAGGTC GGCATGGCGC TGACCGCGCA TAAGACGGTT TCGATGTTCA TGCGGTATGT TCACGCGGAA GATGACCCGG TTCGGGCGGC CGCGGAGAAG GTGGCTGCCC TGCGCCAGGA AACCATCGGT AGCGCCGTCG TCACCCCCAA CGCGGCGAAG GAAGCGACAG GCGGGGGCGG GGCTACGCCC ACGAGCTTGG GGAACTATCG GCCGTACCGG CACCGTAAGG CGCCGACACG CTCGGTGCCG CCCGGCACGA AGCGGGCATC GGCAACGCCC GAATCGGTAG CTTGA
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Protein sequence | MTVTKLTKSI VDAAQPSDKD YELRDTIVPG FLCKVTASGR KIFMLHYRTN SGERRKPRIG RFGELTVEQA RSIAQDWMAD VRKGSDPSAA KQAARQAPTV KELCTQFIEE YSKTRNKPST VATYQDHINR YIVPKLGKIK VPELTRVDVA EVMRDMAKIS STANRTLACL RKMFNMAEVW GYRPDGSNPC RHVPKYRENG ETRYITDEEL ARLYAYLDRA DAEGLEHPTL TLAIRLQFEF SARMSEIRTL QWAWIDFENR RVAWPDSKTG GISKPMSEVA HQLLSNAERI EDSPYVCPSI YDGNLPLPSG TYYNSWRRIL LRAKVPHVGT HGIRHRAATD IANSGVPLKV GMALTAHKTV SMFMRYVHAE DDPVRAAAEK VAALRQETIG SAVVTPNAAK EATGGGGATP TSLGNYRPYR HRKAPTRSVP PGTKRASATP ESVA
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