| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2924 |
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| Symbol | |
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| ID | 4673299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3096608 |
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| End bp | 3098143 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639839979 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_987139 |
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| Protein GI | 121595243 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCAC AACCGCTGCT CACACAACTG CTGCGACAAG CAGGCACGGC GCTCTGCACG
ATCTCACTGG TCGGCTGCGC GGTTGGTCCT GACTTCGTGA AACCCGACGA CAGGCTTGCG
ACCGTTCAAC TGTCGCCCAG GGCGGACTAC GCGCAACCGA ATGAAACATC CGCTGCGAAC
TTCCCATCTT CGTGGTGGAC CTTGTTCAAC GACCCCGTGC TAGCGGGTCT GCAATCCCGT
GCGCAGGCGG GCAACCTCAA CTTGCAGATC GCCTCCGAAC GCATCGAGCA AAGCCGAGCG
CAGTTGGGGA TTGCCTCCTC GCTGCTGCTG CCCAGCGTGG GCGTCTCGGC GGGCTATTCC
CGCGAGGCGA TCAGCGAGCA CGGCAAGTTT GCCGCGCTGG GCGCACCGAC GAGCGCGAGC
GATTTCTGGC AGTTGGGATT CGAAGCCAGT TGGGAACTCG ATCTATGGGG CCGTGCGCGG
CGATCGCGTG AAGGCGCCGC GGCTGCCTTC GAGGCCACGG TGTATGAGCG CGAGGCGGCA
CGGGTGGCCT TGTCCGCCGA GGTGGCCCGC GCCTATCTCC AGTTGCGCGG TGCGCAAGCG
CAACTGGACA TCACCCGGCA GAACCTGGAG GTCGCCGATC GCACTCTCCG CCTTGCAGAA
AGCCGTGAGC GCAATGGTGT CGCCACGCGC TTTGAAACCT CTTCGGCGCG CGCGCAATTG
GCAACGGTCG AGGCGCTGGT GCCCGAACTG GTCCAGCGCC GCAACACGCT GATGAACGCC
TTGGCACTGC TGCTGGGTGA GGAGCCGCGC GCCCTCGATG CGCAGTTGCT TGAAGCGATG
CCCTTACCTT CGCTTCCTTC CAATGTGCCG GTGGGCTTGC CCTCCGAATT GGCGCACAGG
CGGCCGGACA TACAGCGCGC CGAAGCCCAA CTCCATGCTG CAACGGCGGC CATCGGCGTC
GCCAAAGCCG ATTTCTACCC GCGGATCGGC CTGCGGGGAA GAGTCGGCGT CGAAGCCTTC
GAGTTCAACG ACCTCGACAG TTGGGATTCC CGGTTCTTCT CCGTCGGCCC GACGGTCTAT
CTCCCCATCT TCCAAGGCGG TCGTCTGAAG CAGCGCGTGG CGCTGAACGA GGCACGGCAA
AGAACAGCCG CCATCGCCTA CCGGCAGACG GTACTGCAAG CCTGGCATGA AGTGGACAAC
GCTCTGGACG CTTGGGCCGC TCAGCAGAAC CGCCATGCCG AATTGCGGGT CTCGTATGAG
CAGAACAAGC AGGCGCTGCA TGCTGCCGAG CGCGGCTATC AGGAAGGCGC TGCCGACTAC
TTGAATGTCC TGGCCGCGCA GCGCGGCGTC CTCGCCAGCC AGACCAGCCT CAATGCCAGC
GCCACCAACG CCGCGCTCAC CCTGGTCAAT CTCTACAAGT CGCTGGGCGG TGGCTGGGAC
CCTGATGCAC TCACATCCGG GCGACAGGCC GGTGGCGATG CACCTCTGAC GACCACCACA
TCGCCGGCCA GCTTGCAATC AAAGGTTGAC CAATGA
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| Protein sequence | MTSQPLLTQL LRQAGTALCT ISLVGCAVGP DFVKPDDRLA TVQLSPRADY AQPNETSAAN
FPSSWWTLFN DPVLAGLQSR AQAGNLNLQI ASERIEQSRA QLGIASSLLL PSVGVSAGYS
REAISEHGKF AALGAPTSAS DFWQLGFEAS WELDLWGRAR RSREGAAAAF EATVYEREAA
RVALSAEVAR AYLQLRGAQA QLDITRQNLE VADRTLRLAE SRERNGVATR FETSSARAQL
ATVEALVPEL VQRRNTLMNA LALLLGEEPR ALDAQLLEAM PLPSLPSNVP VGLPSELAHR
RPDIQRAEAQ LHAATAAIGV AKADFYPRIG LRGRVGVEAF EFNDLDSWDS RFFSVGPTVY
LPIFQGGRLK QRVALNEARQ RTAAIAYRQT VLQAWHEVDN ALDAWAAQQN RHAELRVSYE
QNKQALHAAE RGYQEGAADY LNVLAAQRGV LASQTSLNAS ATNAALTLVN LYKSLGGGWD
PDALTSGRQA GGDAPLTTTT SPASLQSKVD Q
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