| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2913 |
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| Symbol | |
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| ID | 4673856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3086507 |
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| End bp | 3088504 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639839970 |
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| Product | conjugal transfer coupling protein TraG |
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| Protein accession | YP_987130 |
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| Protein GI | 121595234 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGGGA CGAACGTGCT GTTCGGTCAG ATTGCCGTGG TATTCGGCAT CTTGATCGCC
GGCGTGTGGG GCGCCACACA ATGGACAGCA GCCGCCCTTG GCTATCAAGT ACGCCTTGGC
TCGCCCTGGT TCGATTTTCT TGGCACGCCG ATCTACCACC CGTGGAAGTT GTTTGAGTGG
TGGTTCGTTT TCGATGCTTA CGCGCCGCGC GTGTTCGATA CCGGCGGCGC CATCGCGGGC
GGCAGTGGGT TATTGGCGGT GGTCGTCGCC ATCGGCATGT CGATCTGGCG ATCGCGGCAG
TCGCGCCTGG TCACGACTTA CGGCTCGGCC CGCTGGGCGA ACGCGGATGA CATTCACAAG
GCGGGCCTGA CGCAACCGGC CGGCGTTTTC CTCGGCCAGC ACGGCCGCCA GTACCTGCGC
CACGAAGGCC CGGAACACGT CCTGACCTTC GCGCCCACGC GCTCGGGCAA AGGTGTCGGT
CTGGTGGTGC CGACGTTGCT GTCCTGGCCC GCGTCGGCCG TCATCCACGA CATCAAGGGC
GAGAACTGGC AGATCACCGC CGGCTGGCGC TCGCGCTTCT CGCATTGCCT GCTGTTCAAC
CCCACGGATG CGAAGTCGGC GGCCTACAAC CCGCTGCTGG AGGTTCGACG CGGCGCGCAT
GAAGTGCGCG ACGTGCAGAA CATCGCGGAC ATTCTGGTCG ATCCCGAAGG CGCGCTGGAG
AAGCGCAACC ATTGGGAGAA GACCTCGCAC GCGCTGCTGG TCGGGGCCAT CCTGCATGTG
CTCTACGCGG GCGAAGACAA GACGCTGCGC GGCGTCGCCA ACTTTCTGTC CGACCCGGCC
AGCCCGTTCG AGCTGACCTT GCACCGGATG ATGACCACGC CGCACCTCGG CGATGGGCCG
CATCCGGTCG TCGCATCGGC GGCGCGTGAA GTCCTCAACA AGAGCGACAA CGAACGCTCG
GGCGTGCTGT CCACGGCCAT GTCGTTCCTC GGCCTGTACC GCGATCCGAC CGTGGCCGAA
GTCACGTCGC GCTGCGATTG GCGCATCGCC GACCTGATCG CGGCCGAGCA TCCGGTGTCG
CTGTATCTGG TGGTACCGCC TTCGGACATT TCGCGGACGA AGCCGCTCAT CCGTCTGATC
CTCAACCAGA TCGGGCGGCG CCTTACCGAA TCGCTCGATG GCTCCGATGG CATCGAGCGC
CGCCACAAGC TGCTGCTGAT GCTCGATGAG TTCCCGGCGC TGGGGCGCTT GGACTTCTTC
GAGACGGCGC TGGCCTTCAT GGCGGGCTAC GGCATCCGCA GCTTCCTCAT CGCGCAGTCG
CTCAACCAGA TCGACAAGGC GTATGGGCAA AACCACTCCA TCCTCGACAA CTGCCATGTG
CGCGTGACGT TCGCCACGAA CGACGAGCGC ACCGCCAAAC GGATCTCCGA AACGCTCGGT
ACAGCCACCG AACTGCGCGC CCAGCGCAAC TACGCGGGCC ACCGGCTCGC GCCGTGGCTG
GGCCACCTGA TGGTGTCGCG CCAGGAAACC GCGCGCCCGC TGCTGACGCC GGGCGAAGTC
ATGCAGCTTC CGCCCGACGA GGCGGTGGTG ATGGTGTCCA GCGTGGCGCC GATCAAGGCG
AAGAAGCTGC GCTACTACGC GGACAGCAAT TTCAAGCATC GCTTGCTGCC GCCGCCCACG
CTGGCGGACG GGCAGTACGC CGACGCGCCG CCGGCCCGCG CCGATAACTG GAGCGGGCTG
GCAATTCCTG CGGTGCCGGC ATCTCTCGTC GCGGAGACCG TTGGCGACCT TGGCAGCGCC
GATGACGGCG GCCCGCGTCG CCAGCCCGAA CTCTCCGAAA CCGCCGCCTA CGACCCCGAG
CTGGCCGCGC CTGCGGCCGA CCTTGGGCTG CTCGATGACG ACGACTTGCC GCTTCCCCTT
CCTCGCCAGC TCGACCCAAC CATGCAGCGC ACGGCCCGGC TGGCTTCCCT CGACCCTGAC
GACGGAATCG ACCTATGA
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| Protein sequence | MQGTNVLFGQ IAVVFGILIA GVWGATQWTA AALGYQVRLG SPWFDFLGTP IYHPWKLFEW
WFVFDAYAPR VFDTGGAIAG GSGLLAVVVA IGMSIWRSRQ SRLVTTYGSA RWANADDIHK
AGLTQPAGVF LGQHGRQYLR HEGPEHVLTF APTRSGKGVG LVVPTLLSWP ASAVIHDIKG
ENWQITAGWR SRFSHCLLFN PTDAKSAAYN PLLEVRRGAH EVRDVQNIAD ILVDPEGALE
KRNHWEKTSH ALLVGAILHV LYAGEDKTLR GVANFLSDPA SPFELTLHRM MTTPHLGDGP
HPVVASAARE VLNKSDNERS GVLSTAMSFL GLYRDPTVAE VTSRCDWRIA DLIAAEHPVS
LYLVVPPSDI SRTKPLIRLI LNQIGRRLTE SLDGSDGIER RHKLLLMLDE FPALGRLDFF
ETALAFMAGY GIRSFLIAQS LNQIDKAYGQ NHSILDNCHV RVTFATNDER TAKRISETLG
TATELRAQRN YAGHRLAPWL GHLMVSRQET ARPLLTPGEV MQLPPDEAVV MVSSVAPIKA
KKLRYYADSN FKHRLLPPPT LADGQYADAP PARADNWSGL AIPAVPASLV AETVGDLGSA
DDGGPRRQPE LSETAAYDPE LAAPAADLGL LDDDDLPLPL PRQLDPTMQR TARLASLDPD
DGIDL
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