Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2910 |
Symbol | |
ID | 4672513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3084659 |
End bp | 3085036 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639839967 |
Product | conjugal transfer protein TrbC |
Protein accession | YP_987127 |
Protein GI | 121595231 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3838] Type IV secretory pathway, VirB2 components (pilins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCACG CTGATGCTTT CCGTATTTCC GCAAATCCGC TTCCTCGGCC CGCACGGCTG GATGGCCTGG CTCGCCCGGC CATGCAGGGC TTGATGCTCG CGGCGCTGAT GTTGCTGCTC GCAGGCACCG CGCAGGCCGC GGGTTCCTCG ATGCCCTGGG AAGGGCCGCT GCAATCCATC CTCGAATCCA TCCAGGGGCC GGTGGCGCGC ATCGTCGCGG TCATCATCAT CATCGCCACG GGCTTGGCGC TGGCCTTCGG CGATACCTCG GGCGGGTTCC GCAAGCTGAT CCAGATCGTG TTTGGCCTGT CCATCGCGTT CGCCGCTTCG AGCTTCTTCC TGTCGTTCTT CAGCTTCTCC GGTGGGGCCG TCGTATGA
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Protein sequence | MTHADAFRIS ANPLPRPARL DGLARPAMQG LMLAALMLLL AGTAQAAGSS MPWEGPLQSI LESIQGPVAR IVAVIIIIAT GLALAFGDTS GGFRKLIQIV FGLSIAFAAS SFFLSFFSFS GGAVV
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