| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2907 |
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| Symbol | |
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| ID | 4672425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3081220 |
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| End bp | 3081948 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639839964 |
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| Product | conjugal transfer protein TrbJ |
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| Protein accession | YP_987124 |
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| Protein GI | 121595228 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
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| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.450619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAAGC GTCTTCTCGC CGCCGCCGTC GCGGCCATGC TTTGCACCGC TACCGCCGTG
CAGGCGCAAT GGGTCGTGAT CGACCCTACG AACCTCGTGC AGAACACGCT GACCGCGATC
CGCACGCTGG AGCAGATCAA CAACCAGATC AAGCAGCTCC AGCACGAAGC GCAGATGCTC
ATCAACCAGG CGCGCAACCT CGCCAGCCTG CCGTCCAGCG TAGTGGGCCA GTTGCGCGCC
AACCTGGCGA CCACGCAGCG GCTGATCGCG CAGGCCAAGG GCCTGGCCTA TGACGTGACC
AATCTGGATC GGGAGTTCCA GCGCCTGTAC CCGGAGCGGT ACGCCGCCAC CGTCAGCGGC
AATCAGATGT ACCGCGACGC GCAGGAGCGT TGGAAGAACA CGCTCAGCGG CCTGCAGACC
ACCATGCAGA TGCAGGCCCA GGCGTCGCAG AACCTGAGCG ACGACGAAGG CGTGCTGGCC
GACCTCGTGG GCAAGAGCCA GTCGGCCGTG GGCGCTTTGC AGGCGATGCA GGCCATGAAC
CAGCTTCTGG CCTTGCAGGC CAAGCAGTCC ATCCAGACGC AGCGCCTGAG CATCACCCAG
GATCGTGCCG CTTCGCTGGA ACTGGCGCGG CAGGCCGCCG CTGTGGAGCG AGGCCGCGAG
GTGAACCGGC GCTTCCTGGG TGAAGGCACG CCGTACACGC CGCAGTCCGT CGATTTCTAC
AGCCGTTGA
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| Protein sequence | MKKRLLAAAV AAMLCTATAV QAQWVVIDPT NLVQNTLTAI RTLEQINNQI KQLQHEAQML
INQARNLASL PSSVVGQLRA NLATTQRLIA QAKGLAYDVT NLDREFQRLY PERYAATVSG
NQMYRDAQER WKNTLSGLQT TMQMQAQASQ NLSDDEGVLA DLVGKSQSAV GALQAMQAMN
QLLALQAKQS IQTQRLSITQ DRAASLELAR QAAAVERGRE VNRRFLGEGT PYTPQSVDFY
SR
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