| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2903 |
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| Symbol | |
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| ID | 4671945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3077854 |
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| End bp | 3078834 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639839960 |
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| Product | conjugal transfer protein TrbG/VirB9/CagX |
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| Protein accession | YP_987120 |
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| Protein GI | 121595224 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.369885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGATC TTTTCCGTAA ATTCGCCTTG CCGATCATGT TGCTTGCCCT CGCGGGCTGC
GCCACGCAGG GCAAGCCGCC GCCGTCCATT TCGCTCGACG AGCCGGTGCA GGCCCAGCCG
CTACCGGAGC CGCCTGCGCC GGTGGAGGTG GTGGCCATGC CGCAAGTGCT GCCGATGCCG
GCTCAGATGA AGCCTGTGCC GGATGCCAAG CCCGCCGCAG AATCCGCCGA TGAAACCGTG
CGGGTGTCCC GCGCCAACGC CGAGGCGCGT ATCGCGCCCA CGCGCGAGGG CTACGTCAAC
GCGATTCAGG TGTGGCCCTT CACTGATGGC GCGCTGTATC AGGTCTATGC GGCCGTGGGC
CGCGTGACCG TGATCGTGCT TCAGCCAGGC GAGGAACTGG TGACGGTGGC TGCTGGCGAC
ACGGTGCGCT GGATCGTGGG CGACACATCG AGCGGCAGCG GCGATGCGCT GCGCGTCAAT
GTGATGGTCA AGCCGATCCG CTCGGGCCTC AAGACCAATC TGGTCATCAC GACCAGCCGG
CGCACGTACC TGATTGAGCT GACTTCGACC GAGAAGACGT GGATGGCGTC GGTGTCCTGG
GAGTATCCGA AGGACAAGAT GCTGGCCTTG CAGCGCCAGG CGCAGGCGGC CAGCGCCGCC
GCGCCGGTCG ATAGCGGGCT ATTGCTGGAG AAGATCCGTT TCCGCTACGC GGTCAGTGGC
AGCAACCCGC CGTGGAAACC GCTGCGCGCC TTCGATGATG GCGAGAAGGT CTATATCCAG
TTCCCGCCGG GCATCGCCCA GGGCGAGTTG CCACCGCTGT TCGTCATCGG CGCGCAAGGT
GACGGGCAAC TGATGAACTA CCGTTTCCGC TCGCCGTACT ACATCGTGGA TCGCCTGTTC
GGCGCGGCCG AACTGCGCCT GGGCGGGGAC AAGGGCGACG TGGTGCGGAT TGAGCGCACG
GACGGCACAA GGAAGAATTG A
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| Protein sequence | MNDLFRKFAL PIMLLALAGC ATQGKPPPSI SLDEPVQAQP LPEPPAPVEV VAMPQVLPMP
AQMKPVPDAK PAAESADETV RVSRANAEAR IAPTREGYVN AIQVWPFTDG ALYQVYAAVG
RVTVIVLQPG EELVTVAAGD TVRWIVGDTS SGSGDALRVN VMVKPIRSGL KTNLVITTSR
RTYLIELTST EKTWMASVSW EYPKDKMLAL QRQAQAASAA APVDSGLLLE KIRFRYAVSG
SNPPWKPLRA FDDGEKVYIQ FPPGIAQGEL PPLFVIGAQG DGQLMNYRFR SPYYIVDRLF
GAAELRLGGD KGDVVRIERT DGTRKN
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