| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2896 |
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| Symbol | |
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| ID | 4671186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 3069914 |
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| End bp | 3072844 |
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| Gene Length | 2931 bp |
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| Protein Length | 976 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639839953 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_987113 |
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| Protein GI | 121595217 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.588712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTAT CCTCCGAACC ACTGCCCCAG GCGGCATCCC ACGGGATGCC GTTTTTCATT
GCCATGAGCG ACACGATCGA ACAACCCGGC CTGAACAGCC TCTCCAAGTC CTTTGAGCCC
GCCGCCCTGG AGGCCCACTG GGGCCCCGAA TGGGAAAAGC GCGGCTACGG CGTGGCAGGC
TACCGCGGCA CGGGCGCGGC GCGGGCCGGG CAGCCGGCGT TCGCCATCCA GCTGCCTCCG
CCCAACGTGA CGGGCACGCT GCACATGGGG CACGCGTTCA ACCAGACCAT CATGGACAGC
CTGACGCGCT ACCACCGCAT GCTGGGCCAC AACACCGTCT GGGTGCCGGG CACCGACCAC
GCGGGCATTG CCACACAAAT CGTCGTCGAG CGCCAGCTGC AAGAGCAAGG CGTGAGCCGC
CATGACCTGG GCCGCCCCGA CTTCGTGAAG AAGGTGTGGG AGTGGAAGGA AAAGAGCGGC
AACACCATCA CCACCCAGAT GCGCCGCCTG GGCGACAGCG TGGACTGGAG CCGCGAGTAC
TTCACCATGG ACGACAAGCT CTCCAAGGTG GTGACCGACA CCTTCGTGAA GCTCTACCAG
CAGGGCCTGA TCTACCGCGG CAAGCGCTTG GTGAACTGGG ACCCCAAACT GCAGTCCGCC
GTGTCGGACC TGGAAGTGGA GAACGAGGAA AAAGACGGCT CGCTGTGGCA CATCGCCTAC
CCCTTGGCCG ACGGCAGCGG CCAGCTGGTG GTGGCCACCA CCCGCCCCGA GACCATGCTG
GGCGACGTGG CGGTGATGGT GCACCCCGAG GATGAGCGCT ACGCGCACCT GATCGGCAAG
ATGGTCAAGC TGCCGCTGTG CGACCGCGAG ATCCCGGTGA TTGCCGACGC CTATGTGGAC
AAGGAGTTCG GCACCGGCGT GGTCAAGGTC ACGCCCGCGC ACGACAACAA CGACTACCAG
GTGGGCCAGC GCCACAAGCT GCCCATGATT TGCGTGCTCA CCCTGCAGGC CACGGTGAAC
GAGAACGCCC CCGCCAAGTA CCAGGGCATG GACCGCTTCG TGGCGCGCAA GGCCATCGTG
GCCGACCTGG AGGCCCAGGG CCTGCTGGTC GAGACCAAGA AGCACAAGCT GATGGTGCCC
ATTTGCACCC GCACCGGCCA GGTGATCGAG CCCATGCTGA CCGACCAGTG GTTCGTGGCC
ATGAACAAGG TGGCCCAAGA AGGCACGGGC GACGCCACCG GCAAGAGCAT CGCGCAAAAG
GCCATCGACG CCGTGGCCAG CGGCCAGGTG CAGTTCGTGC CCGAGAACTG GGTCAACACC
TACAACCAGT GGATGAACAA CATCCAGGAC TGGTGTATCA GCCGCCAGCT GTGGTGGGGC
CACCAGATCC CCGCCTGGTA CGACGAAGAC GGCAATGTGT ACGTGGCCCG CAACGAACAA
GAGGCCCAGG CCCAGGCCCC CGGCAAGACG CTGACCCGCG ATGCGGACGT GCTCGACACC
TGGTACTCCA GCGCCCTGGT GCCCTTCAGC ACCATGGGCT GGCCAAACCA GACCGATGGT
GCCACCGACG ACTACAACCT GTACCTGCCC AGCAGCGTGC TGGTCACGGG CTACGACATC
ATCTTCTTCT GGGTCGCCCG GATGATCATG ATGACCACGC ACTTCACCGG GCGCGTGCCG
TTCAAGCATG TCTACATCCA CGGCCTGGTG CTGGACGCAC AGGGCAAGAA GATGAGCAAG
TCCGAGGGCA ACGTGCTCGA CCCGGTGGAC CTGATCGACG GCATTGCGCT GGAGCCGCTG
CTGGACAAAC GCACCCAGGG CCTGCGCCGC CCCGAGACCG CGCCCAAGGT GCGCCAGAAC
ACGCAAAAGG AATTCCCCGA GGGCATTCCC GCCTATGGCG CCGACGCGCT GCGCTTCACC
TTCGCCGCGC TGGCGTCGCT GGGCCGCAGC ATCAACTTCG ACAGCAAGCG CTGCGAGGGC
TACCGCAACT TCTGCAACAA GCTGTGGAAC GCCAGCCGCT TCGTGCTGAT GAACTGCGAG
GGCTACGACT GCGGCATGGA CACCGCGCAG GGCTGCACTG AAAGCTACCT GCGCTTCAGC
CAGGCCGACC GCTGGATCGT CTCGCAGCTG CAACAGGTAG AGGCCGAAGT GGCCAAGGGC
TTCGCCGAGT TCCGCTTGGA CAACGTGGCC AACACCCTCT ACGACTTCGT CTGGAACGAG
TTCTGCGACT GGTACCTGGA AATCGCCAAG GTGCAGATCC AGACTGGCAA CGAAGCGCAG
CAGCGCGCCA CGCGCCGCAC GCTGATCCGT GTGCTGGAGG CCATCCTGCG CCTGGCGCAC
CCCGTCATCC CCTTTGTCAC CGAAGCGCTG TGGCAGGTAG TGGCCCCGCT CGCGGGCCTG
AAGGGCGACT CCATTGCCAT CGCCGCCTAT CCGCAGTCCC AGCCCGAGAA AATCGACGAG
GGCTCCATCG CCTACGTGGC GCGCATCAAG CAGGTGGTGG ACGCCTGCCG CACGCTGCGC
GGCGAGATGG GCGTGTCGCC CGCACAGCGC CTGCCGCTGC TGGTGGCGGG CGACGCGGAC
TTCATGCGCG ACATCGCCCC GGTGCTGCAG AACCTGGCCA AGCTCAGCGA GGTGAAGGTG
TTCGACGACG AGGCCGCCTG GGCCCAGGCC GCGCAAAGCG CGCCCGTGGC CGTGGTGGGC
GACGCCCGCC TGGCGCTGTT CGTGGAGATC GACATCGCTG CTGAAAAGGC CCGCCTGTCC
AAGGAGGCCG CGCGCCTGTC CGGCGAGATC GCCAAGGCCA ACGGCAAACT GGGCAACGAG
GCTTTCGTGG CCAAGGCCCC GCCGGCCGTG ATCGAGCAGG AAAAGAAGCG CGTGGCCGAC
TTCAGCGCCA CGCTGGCGCG CATCCAGGAG CAGCTCGCGC GCCTGGGCTA A
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| Protein sequence | MPLSSEPLPQ AASHGMPFFI AMSDTIEQPG LNSLSKSFEP AALEAHWGPE WEKRGYGVAG
YRGTGAARAG QPAFAIQLPP PNVTGTLHMG HAFNQTIMDS LTRYHRMLGH NTVWVPGTDH
AGIATQIVVE RQLQEQGVSR HDLGRPDFVK KVWEWKEKSG NTITTQMRRL GDSVDWSREY
FTMDDKLSKV VTDTFVKLYQ QGLIYRGKRL VNWDPKLQSA VSDLEVENEE KDGSLWHIAY
PLADGSGQLV VATTRPETML GDVAVMVHPE DERYAHLIGK MVKLPLCDRE IPVIADAYVD
KEFGTGVVKV TPAHDNNDYQ VGQRHKLPMI CVLTLQATVN ENAPAKYQGM DRFVARKAIV
ADLEAQGLLV ETKKHKLMVP ICTRTGQVIE PMLTDQWFVA MNKVAQEGTG DATGKSIAQK
AIDAVASGQV QFVPENWVNT YNQWMNNIQD WCISRQLWWG HQIPAWYDED GNVYVARNEQ
EAQAQAPGKT LTRDADVLDT WYSSALVPFS TMGWPNQTDG ATDDYNLYLP SSVLVTGYDI
IFFWVARMIM MTTHFTGRVP FKHVYIHGLV LDAQGKKMSK SEGNVLDPVD LIDGIALEPL
LDKRTQGLRR PETAPKVRQN TQKEFPEGIP AYGADALRFT FAALASLGRS INFDSKRCEG
YRNFCNKLWN ASRFVLMNCE GYDCGMDTAQ GCTESYLRFS QADRWIVSQL QQVEAEVAKG
FAEFRLDNVA NTLYDFVWNE FCDWYLEIAK VQIQTGNEAQ QRATRRTLIR VLEAILRLAH
PVIPFVTEAL WQVVAPLAGL KGDSIAIAAY PQSQPEKIDE GSIAYVARIK QVVDACRTLR
GEMGVSPAQR LPLLVAGDAD FMRDIAPVLQ NLAKLSEVKV FDDEAAWAQA AQSAPVAVVG
DARLALFVEI DIAAEKARLS KEAARLSGEI AKANGKLGNE AFVAKAPPAV IEQEKKRVAD
FSATLARIQE QLARLG
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