Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2890 |
Symbol | hemC |
ID | 4670637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 3063703 |
End bp | 3064665 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639839947 |
Product | porphobilinogen deaminase |
Protein accession | YP_987107 |
Protein GI | 121595211 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTGCGG GGGCCGAGAC AGACGCCGCA ATGACCACTC CCTCCCCCTC GCTTCCTTCC ATCGTGATCG CCACGCGCGA AAGCCAACTC GCGCTCTGGC AGGCCGAGCA TGTGCAGTCC TTGCTGCGCG CGCGCGGCCA TGCCGTGGCG CTGCTGGGCA TGACCACGCG CGGCGACCAG ATCCTGGACC GCACGCTGTC CAAGGTGGGC GGCAAGGGCC TGTTCGTGAA GGAGCTGGAA GTGGCGCTGG AGGAAGGCCG CGCCGACATC GCGGTGCATT CGCTCAAGGA CGTTCCCATG GAGCTGCCCC AGGGCTTCGC CCTGGCCTGT GTGATGGAGC GCGAGGACCC GCGCGACGCC TTCGTGTCGC CCGGCTACGC ATCGCTGGAC GAGCTGCCCC ACGGTGCGGT GGTGGGCACG TCCAGCCTGC GCCGCCAGGC GCTGCTGCAA GCGCTGCGCC CCGACCTGCA GATCGAGCCG CTGCGCGGCA ACGTGCAGAC GCGCTTGCGC AAGCTGGACG AGGGCCAGTA CGCGGCCATC GTGCTCGCGG CCGCAGGCCT GAAGCGCCTG GGCCTGCACG AGCGCATCCG CGCCGTGTTC ACGCCCGAGC AGATGCTGCC CGCCGCCGGC CAGGGCGCGT TGGGCATCGA GATCCGCGGC GACCGACACG ACCTGCGCGA GGCGCTGGCG CCGCTGGCCC ATGAGCGCAC CTGGCTCACG GTGACGGCCG AGCGTGCCGT GAGCCGCGCC ATGGGGGGGA GCTGTTCCAT GCCGCTGGCC GCACATGGCC AGTGGGACGG CGACACGCTC TCGCTGCGCG CCGCCTGGGG CGACGTCGCG GCCCGGGTGC CGCTGGTACG CGCCGAGGGC GCGGCCCCCG TGCATACGCT GGAGCAGGCC GATGCGCTGG GACTGGCCGT CGCCGCACAG CTGCGCACTG CGGGCGCGGT GGGAGCGCTC TGA
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Protein sequence | MPAGAETDAA MTTPSPSLPS IVIATRESQL ALWQAEHVQS LLRARGHAVA LLGMTTRGDQ ILDRTLSKVG GKGLFVKELE VALEEGRADI AVHSLKDVPM ELPQGFALAC VMEREDPRDA FVSPGYASLD ELPHGAVVGT SSLRRQALLQ ALRPDLQIEP LRGNVQTRLR KLDEGQYAAI VLAAAGLKRL GLHERIRAVF TPEQMLPAAG QGALGIEIRG DRHDLREALA PLAHERTWLT VTAERAVSRA MGGSCSMPLA AHGQWDGDTL SLRAAWGDVA ARVPLVRAEG AAPVHTLEQA DALGLAVAAQ LRTAGAVGAL
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