Gene Ajs_2890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2890 
SymbolhemC 
ID4670637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3063703 
End bp3064665 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content73% 
IMG OID639839947 
Productporphobilinogen deaminase 
Protein accessionYP_987107 
Protein GI121595211 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0181] Porphobilinogen deaminase 
TIGRFAM ID[TIGR00212] porphobilinogen deaminase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTGCGG GGGCCGAGAC AGACGCCGCA ATGACCACTC CCTCCCCCTC GCTTCCTTCC 
ATCGTGATCG CCACGCGCGA AAGCCAACTC GCGCTCTGGC AGGCCGAGCA TGTGCAGTCC
TTGCTGCGCG CGCGCGGCCA TGCCGTGGCG CTGCTGGGCA TGACCACGCG CGGCGACCAG
ATCCTGGACC GCACGCTGTC CAAGGTGGGC GGCAAGGGCC TGTTCGTGAA GGAGCTGGAA
GTGGCGCTGG AGGAAGGCCG CGCCGACATC GCGGTGCATT CGCTCAAGGA CGTTCCCATG
GAGCTGCCCC AGGGCTTCGC CCTGGCCTGT GTGATGGAGC GCGAGGACCC GCGCGACGCC
TTCGTGTCGC CCGGCTACGC ATCGCTGGAC GAGCTGCCCC ACGGTGCGGT GGTGGGCACG
TCCAGCCTGC GCCGCCAGGC GCTGCTGCAA GCGCTGCGCC CCGACCTGCA GATCGAGCCG
CTGCGCGGCA ACGTGCAGAC GCGCTTGCGC AAGCTGGACG AGGGCCAGTA CGCGGCCATC
GTGCTCGCGG CCGCAGGCCT GAAGCGCCTG GGCCTGCACG AGCGCATCCG CGCCGTGTTC
ACGCCCGAGC AGATGCTGCC CGCCGCCGGC CAGGGCGCGT TGGGCATCGA GATCCGCGGC
GACCGACACG ACCTGCGCGA GGCGCTGGCG CCGCTGGCCC ATGAGCGCAC CTGGCTCACG
GTGACGGCCG AGCGTGCCGT GAGCCGCGCC ATGGGGGGGA GCTGTTCCAT GCCGCTGGCC
GCACATGGCC AGTGGGACGG CGACACGCTC TCGCTGCGCG CCGCCTGGGG CGACGTCGCG
GCCCGGGTGC CGCTGGTACG CGCCGAGGGC GCGGCCCCCG TGCATACGCT GGAGCAGGCC
GATGCGCTGG GACTGGCCGT CGCCGCACAG CTGCGCACTG CGGGCGCGGT GGGAGCGCTC
TGA
 
Protein sequence
MPAGAETDAA MTTPSPSLPS IVIATRESQL ALWQAEHVQS LLRARGHAVA LLGMTTRGDQ 
ILDRTLSKVG GKGLFVKELE VALEEGRADI AVHSLKDVPM ELPQGFALAC VMEREDPRDA
FVSPGYASLD ELPHGAVVGT SSLRRQALLQ ALRPDLQIEP LRGNVQTRLR KLDEGQYAAI
VLAAAGLKRL GLHERIRAVF TPEQMLPAAG QGALGIEIRG DRHDLREALA PLAHERTWLT
VTAERAVSRA MGGSCSMPLA AHGQWDGDTL SLRAAWGDVA ARVPLVRAEG AAPVHTLEQA
DALGLAVAAQ LRTAGAVGAL