Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2885 |
Symbol | |
ID | 4670670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 3056663 |
End bp | 3057202 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639839942 |
Product | transcriptional activator FlhC |
Protein accession | YP_987102 |
Protein GI | 121595206 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.217892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCAC CCGCCAAGAG CGTTCTCAAC GAATCCAAGC AAATCGAACG CGCCGCCATG CTGATCGAGA TGGGAGCCCG CATGCAGGTG CTGGAGTCCG AGACCACGCT GTCGTACGAA CGCCTCATCC GCCTGTACAA GGAGATCGCG GGCAAGTCGC CGTCCAAGGG ACAGCTGCCC TTCTCCACGG ATTGGTTCCT CACCTGGCAG GAGAACATCC ACAGCTCGCT GTTCCTGAAC ATCTACGAAT ACCTGTCCAA GGGCGTGAGC CTGGACGCGG TGGAGCTGCT CACCAAGGCC TATCGCCTCT ACAACGAGCA GGTGGCCGCA GCGCAGATCG ACCCGCTGCT GTCCTTCACG CGCGCCTGGC GGCTGGTGAA GTTCGTGGAT GCCGGCATGC TCACGCGCAC CAAGTGCTCG CAGTGCGGCG GCCAATTCGT CACCGAGCTG TACGAGAACC GCCACTACAC CTGCGGCCTG TGCAACCCGC CCGCACGTGC CGGCAAGAGC AAGAGCGCCG GCGCACTCAC GCTGCACTAA
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Protein sequence | MSAPAKSVLN ESKQIERAAM LIEMGARMQV LESETTLSYE RLIRLYKEIA GKSPSKGQLP FSTDWFLTWQ ENIHSSLFLN IYEYLSKGVS LDAVELLTKA YRLYNEQVAA AQIDPLLSFT RAWRLVKFVD AGMLTRTKCS QCGGQFVTEL YENRHYTCGL CNPPARAGKS KSAGALTLH
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