| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2877 |
|---|
| Symbol | |
|---|
| ID | 4670522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 3047085 |
|---|
| End bp | 3049172 |
|---|
| Gene Length | 2088 bp |
|---|
| Protein Length | 695 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639839934 |
|---|
| Product | Na+/solute symporter |
|---|
| Protein accession | YP_987094 |
|---|
| Protein GI | 121595198 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4147] Predicted symporter |
|---|
| TIGRFAM ID | [TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.81009 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGAAC GCGGCGGCGA GGGGCGCAGC TACATGGCGC GCCTGAACCG CATCGTGGCG
CTGTACATCG CGGGGCTGCT GGGGTTCGTG GCCCTGATGG CCTGGGCCGA GCAGCGCGGG
TTGTCGCGCC AGTGGATCGG CCCCATCTTC CTGTTTCTCA CCGTGATGGC CTACGCCGCC
ATCGGCGTGT ACGGCCGCAC CACGGATGCG GACGAATACT ACGTGGCGGG CCGCCGCATC
CCGCCGTTCT ACAACGGCAT GGCCGCCGCC GCGGACTGGA TGAGTGCGGC CTCCTTCATC
AGCCTGTCGG GCGCGCTGTA TCTGCAGGGC TTCTCGGGCA CGCCGGAGCA GCCGGGCGGG
CTGGCCTATC TATTGGGCTG GACGGGCGGC TTCGTGCTCG TGGCCATGCT CATCGCGCCG
CACCTGCGGG CGATGAACCT CTACACCGTT CCGGACTTCT TCCAGGTGCG TTTTGGCGGG
CGCTGGCCAC GCATCATCGC GGCCCTGTCG GCCGTACTGT GCTCTTTCAC CTACGTGGTG
GCGCAGATCT ACGGCGTGGG GCTGATCGCC TCGCGCCTGA CCGGCGTGCA GTTCGAGATC
GGCATCATGC TCGGCCTGGG CGGCGTGCTG CTGTGCTCGT TCCTGGGGGG GATGCGCGCC
ATCACCTGGA CGCAGGTGGC GCAGTACATC GTCATCCTGC TGGCGTTCCT GATCCCGGTG
TCGTGGCTGG CGTATAAGCA GCTCGGCAAC CCCGTTGCAC CGGTGGTGGC GGGAGCACAG
ATCGGCAAGA TCACCACGCT GGAGGGCGGG CTGCTGGCCT CGGAGGTCGA GCAAGACGTG
GTCGCGGCCT ACCTGCAGCG CGCCGAGGAT TACAAGGCGC GGCTGGCCGA CGTGCCCGCC
GCACTCGCGC GTGAGCGCGA AGCGGCGCGC GAGCGCATCC AGCGCCTGCG CGCCCAGAAC
GCCGACGTGG GGCTGATCGT GGCCGCCAGC CGGGATTTGG CCTCCATGCC GCGCGACGAG
GCTGCCGCGC GCGATCGCTG GACGCGCGAG ATGCGCGACA ACTATGAGCG TGCCCGCGCC
ATGGGCGGCC TGCCGCGCCA CAGCCAGGCG TTTGCGGGTG ACCCGCAGGG CACCCCGCAG
GAGCGCCAGA CCTTCGACGA TGCGCGCCGC AACTTCCTGG CGCTGATGTT CTGCCTGATG
GTGGGAACGG CCGGCCTGCC GCACCTGCTG ACGCGCTACT ACACGGTGCC CTCGGTGGCG
GGCGCGCGCG CGTCGGTCGC GTGGTCGCTG TTCTTCATCG CACTGCTGTA CCTGAGTGCG
CCGGCGCTCG CCGTGCTGGT GAAGTTCGAG GTCATGAACA ACCTCGTGGG CAGCAGCTTC
GACCAACTGC CCAACTGGAT GGCGCAATGG GCGCGTGTGG ACGCCTCGCT GCTGTCCGTG
GAGGACGTGA ACGGCGACGG CATCGTGCAG TTCGGCGAGA TCCGCTTCGG GGCCGACCTC
ATCATGCTGG CCACCCCCGA GATCGGCGGG CTCCCCTACG TGATCTCCGG CCTGGTGGCC
GCGGGCGGGC TGGCCGCTGC GCTGTCCACT GCCGACGGCC TGCTGCTCAC CATCAGCAAC
GCGCTGGTGC GCGACCTGTA CCACCAGGAA ACGCGCCGCA AGGCGTCGCC CGAGCAGCGG
GTGATCCTGA CCAAGTTCAC GCTGCTCTCC GTGGGGCTGT CTGCGGCGTT CGTGGCTGCG
CTCAAGCCGT CGGAAATCCT GCCCATGGTG TCGGCGTCGT TTTCCATCGC TGCATCGGCC
TTCGTGCCCG CGATGGTGAT GGGCATCTTC TGGCGCGGTA CTACGCGCCA GGGCGCGGTG
GCCGGCATGC TCGCCGGCCT GTCCGTCACG GTGTATTACC TGTTGGCGCA GGTGGACAGC
GTGCGCGAAT GGGTGCCTTC CGCGCTGCTC GTCGATGGCC TGTGGTTCGG CATCCATCCG
ATTTCGGCCG GGGTCTTCGG CGTGCCGGTG GGCCTGGCTG TGGCGTGGAG CGTCAGCCTG
GCCACGCGGC CGGGCCACGT GCGGCCGGTG CCCGCGGACG GGCTGTAG
|
|---|
| Protein sequence | MIERGGEGRS YMARLNRIVA LYIAGLLGFV ALMAWAEQRG LSRQWIGPIF LFLTVMAYAA
IGVYGRTTDA DEYYVAGRRI PPFYNGMAAA ADWMSAASFI SLSGALYLQG FSGTPEQPGG
LAYLLGWTGG FVLVAMLIAP HLRAMNLYTV PDFFQVRFGG RWPRIIAALS AVLCSFTYVV
AQIYGVGLIA SRLTGVQFEI GIMLGLGGVL LCSFLGGMRA ITWTQVAQYI VILLAFLIPV
SWLAYKQLGN PVAPVVAGAQ IGKITTLEGG LLASEVEQDV VAAYLQRAED YKARLADVPA
ALAREREAAR ERIQRLRAQN ADVGLIVAAS RDLASMPRDE AAARDRWTRE MRDNYERARA
MGGLPRHSQA FAGDPQGTPQ ERQTFDDARR NFLALMFCLM VGTAGLPHLL TRYYTVPSVA
GARASVAWSL FFIALLYLSA PALAVLVKFE VMNNLVGSSF DQLPNWMAQW ARVDASLLSV
EDVNGDGIVQ FGEIRFGADL IMLATPEIGG LPYVISGLVA AGGLAAALST ADGLLLTISN
ALVRDLYHQE TRRKASPEQR VILTKFTLLS VGLSAAFVAA LKPSEILPMV SASFSIAASA
FVPAMVMGIF WRGTTRQGAV AGMLAGLSVT VYYLLAQVDS VREWVPSALL VDGLWFGIHP
ISAGVFGVPV GLAVAWSVSL ATRPGHVRPV PADGL
|
|---|
| |