Gene Ajs_2840 details

Gene Information

• Locus tag: Ajs_2840
• ID: 4672696
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax sp. JS42
• Kingdom: Bacteria
• Replicon accession: NC_008782
• Strand: +
• Start bp: 3011925
• End bp: 3012314
• Gene Length: 390 bp
• Protein Length: 129 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 639839897
• Product: assimilatory nitrite reductase (NAD(P)H) small subunit
• Protein accession: YP_987057
• Protein GI: 121595161
• COG category: [P] Inorganic ion transport and metabolism; [R] General function prediction only
• COG ID: [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases
• TIGRFAM ID: [TIGR02378] nitrite reductase [NAD(P)H], small subunit

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 26
• Fosmid unclonability p-value: 0.41626
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACCACCT GGACCCCGAT CTGCTCCCTG GACGACATCC CCGTGCTCGG CGCGCGCCGC 
GTGGCCCGCC CGCACGGCAT GGACGTGGCC GTCTTCCGCA ACGACGCCGG CGGTGTGTTC 
GCCCTGCTCG ACCGCTGCCC CCACAAGGGC GGCCCCTTGA GCCAGGGCAT CGTCTTCGGC 
AACAGCGTGG CCTGCCCGCT GCACAACTGG ACCATCGGCC TGTGCGACGG CCAGGCCGCC 
GCCCCCGACG AAGGCTGCAC GCCGCGCTTT CAGGTCAAGG TGGAAGCCGG CTCCGTCTAC 
CTGGACGCCC AGGAACTGGC CCACCACGCC CTGGACCTGC AACGCCCCGT GGCCGGCCCC 
GCGCTGCGCT GCAAGGCAAA CCCACCATGA 

 

Protein sequence

MTTWTPICSL DDIPVLGARR VARPHGMDVA VFRNDAGGVF ALLDRCPHKG GPLSQGIVFG 
NSVACPLHNW TIGLCDGQAA APDEGCTPRF QVKVEAGSVY LDAQELAHHA LDLQRPVAGP 
ALRCKANPP