| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2839 |
|---|
| Symbol | |
|---|
| ID | 4672872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 3009383 |
|---|
| End bp | 3011848 |
|---|
| Gene Length | 2466 bp |
|---|
| Protein Length | 821 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639839896 |
|---|
| Product | assimilatory nitrite reductase (NAD(P)H) large subunit precursor |
|---|
| Protein accession | YP_987056 |
|---|
| Protein GI | 121595160 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1251] NAD(P)H-nitrite reductase |
|---|
| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.184658 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAAGC AATCCAGGCT GGTGATGGTG GGCAATGGCA TGGCAGGCGT GCGCGCGCTG
GAAGAGCTGC TCAAGATCGC GCCCGACCTC TACGACATCA CGGTGTTCGG CGCCGAGCCG
CACCCCAACT ACAACCGCAT CCTGCTGTCG CCCGTGCTGG CGGGCGAGCA GACGCTGGAG
GAGATCGTCC TCAACGACTG GTCCTGGTAT GCGGACCACC ACATCACGCT GCACGCGGGG
TGCACCGTGA CCCATGTGGA CCGCACGCGG CGCACCGTGC ATGGCGTGGC GCAGGACGGG
CGCACCGTCG AGGCTCCCTA CGACCGGCTG ATCCTCGCCA CGGGCTCCAA CCCGTTCATG
CTGCCCATTC CGGGCCGTGA GCTGCCCGGC GTGCTGGCCT ACCGCGATAT CGCCGACACG
CAGGCCATGA TCGACGCTGC CGCCAGCTAC AAGCACGCCG TGGTGATCGG CGGCGGCCTG
CTGGGCCTGG AGGCGGCCAA CGGCCTCATG AAGCGCGGCA TGCAGGTCAC CGTGGTGCAT
GCGGGCGAGT GGCTCATGGA GCGCCAGCTT GACGACGTGG CGGGCAAGCT GCTGCAGCAG
TCGCTGGCCG AGCGCGGCAT GCAGTTCCTG ATGCAGGCGC AGACGCAGGA ACTGGTGGCC
GGCGGCGACG GCCGCGTGGC CGCGGTGCGC TTCAAGGACG GCAGCGAGGT GCCCGCCCAG
CTCGTGGTGA TGGCCGTGGG CATCCGCCCC AACACGGCCC TGGCCGAGCA GATGCACCTG
CACGTCAACC GCGGCATCGT CGTCAGCGAC ACGCTGCAGA CCGTGACCGA CCCGCGCATC
TACGCCGTGG GCGAATGCGC GGCGCACCGC GGCATCGCCT ACGGGCTGGT GGCGCCGCTG
TTCGAGCAAG GCAAGGTGCT GGCCAACCAC CTGGCGGAAT GGGGCATCGG GCGCTACCAG
GGCTCGCTCA CCTCCACCAA GCTCAAGGTC ACGGGCATCG ACCTGTTTTC CGCCGGCGAC
TTCCAGGGCG GCGAGGGCAC GGAGGAAATC GTGCTCAGCG ACCCGCATGC CGAGGGTGGC
GGTGTGTACA AGAAGCTGGT GCTCAAGGAC GACCGGCTCG TGGGCGCCTG CCTCTATGGC
GACACGGTGG ACGGCAGCTG GTACTTCAAG CTGCTGCGCG ACGGCCGCAG CGTGGCCGAC
ATCCGCGACC GGCTCATGTT CGGCGAATCG CACCTGGGCG ACGCGGGCCA TCAGGGCCAG
AACAAGGCCG CCGCCATGGC CGACAGCGAC GAGGTGTGCG GCTGCAACGG CGTGACCAAG
GGCCAGATCT GCAAGGCCAT CAAGGACAAG GGCCTGTTCA CGCTGGACGA GGTGCGCAAG
CACACCAAGG CCAGCGCCAG CTGCGGCTCG TGCACCGGGC TGGTGGAGCA GATCCTCATG
GCCACCGCGG GCGGCGACTA TTCCGCCACG CCCAAGACCA AGCCCGTGTG CGCCTGCACC
GACCACGGCC ACCAGGCCGT GCGCGAAGCC ATCCGCACAC ACCGGCTGCT GACCGTGGAC
GGCGTGTTTC GCTTCCTGGA GTGGAAGACG CCCAACGGCT GCGCCACCTG CCGCCCGGCC
GTGAACTACT ACCTCATCAG CACTTGGCCC AAGGAGGCGC GGGACGACCC GCAAAGCCGC
TTCATCAACG AGCGCAGCCA CGCCAACATC CAGAAGGACG GCACCTACAG CGTGGTGCCG
CGCATGTGGG GCGGCGAGAC CAGTGCCGCC GAACTGCGCC GCATCGCCGA CGTGGTGGAC
AAGTACCAGA TCCCCACGGT GAAGGTCACG GGCGGCCAGC GCATCGACCT GCTGGGCGTG
AAAAAGGAAG ACCTGGTCAA CGTCTGGCGC GACATCGGCA TGCCCTGCGG CCACGCCTAC
GCCAAGGCAC TGCGCACCGT GAAGACCTGC GTGGGCAGCG AGTGGTGCCG CATGGGCACG
CAGGACAGCA CGCAGCTCGG CAAGGACCTG GAGCACGCCT TCGTGGGCAT GTACGCGCCG
CACAAGGTCA AGTTCGCCGT CAGCGGCTGC CCGCGCAACT GCGCCGAGAG CGGCATCAAG
GACGTGGGGA TCATCGGCGT GGACTCGGGC TGGGAGATGT ACGTGGCCGG CAACGGCGGC
ATCAAGACCG AGGTGGCGCA GTTCTTCACC AAGCTCAAGA CCGCCGAGGA GGTGCTGGAG
TACACGGGCG CCTTCATGCA GCTGTACCGC CTGGAGGGCT GGTACCTGGA GCGCACGGTG
CATTTCGTCG CCCGCGTGGG ATTGGACTAC GTCAAGCGCC GCGTACTCCA AGATGCCCCC
GGCCGCCAAG CGCTGTGGCG CGAGCTGCAG GACGCGCTGG CGGGCGAGCC CGACCCGTGG
TTCGAGTTCG AGCCGGCGGC GGTGGACCGG CGCCAGTTCA TCCCGATCAC GCCGATCCCC
GCATGA
|
|---|
| Protein sequence | MVKQSRLVMV GNGMAGVRAL EELLKIAPDL YDITVFGAEP HPNYNRILLS PVLAGEQTLE
EIVLNDWSWY ADHHITLHAG CTVTHVDRTR RTVHGVAQDG RTVEAPYDRL ILATGSNPFM
LPIPGRELPG VLAYRDIADT QAMIDAAASY KHAVVIGGGL LGLEAANGLM KRGMQVTVVH
AGEWLMERQL DDVAGKLLQQ SLAERGMQFL MQAQTQELVA GGDGRVAAVR FKDGSEVPAQ
LVVMAVGIRP NTALAEQMHL HVNRGIVVSD TLQTVTDPRI YAVGECAAHR GIAYGLVAPL
FEQGKVLANH LAEWGIGRYQ GSLTSTKLKV TGIDLFSAGD FQGGEGTEEI VLSDPHAEGG
GVYKKLVLKD DRLVGACLYG DTVDGSWYFK LLRDGRSVAD IRDRLMFGES HLGDAGHQGQ
NKAAAMADSD EVCGCNGVTK GQICKAIKDK GLFTLDEVRK HTKASASCGS CTGLVEQILM
ATAGGDYSAT PKTKPVCACT DHGHQAVREA IRTHRLLTVD GVFRFLEWKT PNGCATCRPA
VNYYLISTWP KEARDDPQSR FINERSHANI QKDGTYSVVP RMWGGETSAA ELRRIADVVD
KYQIPTVKVT GGQRIDLLGV KKEDLVNVWR DIGMPCGHAY AKALRTVKTC VGSEWCRMGT
QDSTQLGKDL EHAFVGMYAP HKVKFAVSGC PRNCAESGIK DVGIIGVDSG WEMYVAGNGG
IKTEVAQFFT KLKTAEEVLE YTGAFMQLYR LEGWYLERTV HFVARVGLDY VKRRVLQDAP
GRQALWRELQ DALAGEPDPW FEFEPAAVDR RQFIPITPIP A
|
|---|
| |