| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2826 |
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| Symbol | |
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| ID | 4673567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2991419 |
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| End bp | 2992846 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639839883 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_987043 |
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| Protein GI | 121595147 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.349908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.4485 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGCCG CAGCGCTTCC TTCTCGCTCC CGCCGTCGCC CGCGCGCTTC GGCGCCACTG
GCCTTGCTGG CCGCCCTGGT GCTGGCCGGT TGCGCCACGC GGCCGCCTCC CGCGCTGGAG
GGGGCGGTGG CCACTCCCGC CGCCTGGGCC GGCCAGGGGG CAGTGCAGGG CGGCGCGGCC
GCGACCCCGC AAGACCTGGC CCAGTGGTGG CGGCAACTGG GCGATGCGCA GCTCACCGGC
CTGGTGGAAC GCGCGCTGCA GTCGCACACC AGCATGCGCA GCGCACGCGC CGCCGTGGAG
CAGGCGCGTG CCCAGCGCGA CGTGCAGGCC GCCGGCCTGC TGCCTTCCGT GAACGCATCG
GGCTCCGCCC AGCGCAGCCG CAGCAATGGC AGCACCGGCA ACACTTTCCA GGCGGGACTG
GACGCGAGCT GGGAGCCCGA CCTGTTTGGC CGCCTGTCCA GCGGGGTGCG CGCCAGCGAG
GCCGACCTGC TGGCCGCCGA GGAAGGCGTG GCCGCCGCCC AGGTGGCATT GGCCGCCGAG
GTGGCGGTGA ACTACATCAG CCTGCGCAGC CAGCAGCAGC GCCTGCAGAT TGCCCAGCAG
AACCTGGCGG CGCAGAGCGA AACCGCGCAG ATCGTCCAAT GGCGTGTGCA GGCGGGGCTG
GCCAGTTCGC TGGCGGCCGA GCAGGCCCGC GCCGCCGTGG AGCAGACCGC CGCCCAGGTG
CCCACGCTGC AGGCGGGCAT CGCGCAGGCG CGGCATGCGC TGGCGGTGCT CACCGGCCAG
CCGCCCGCGG CGCTGGACGA GGCCCTGGCC GCGCACGCGC CCGTGCCCCA ACCGCCGGCG
GACCTGGCGC TGGCCTTCCC CGCAGACACG CTGCGCCAGC GCCCCGACGT GCGCCAGGCC
GAGCAGCGCG TGCGCGCCGC CTGGGAGCGC GTCGCCCAGG CCGAGGCGCA GCGCATGCCC
AGCCTGCGCA TCAGCGGAAC GCTGGGCCTG CGCGCCCTCA CGCTGGGCGC GCTCACGGGT
GGGGGCGCCA CGGTGGCGTC GCTGCTGTCC AGCGTGTCGC TGCCGGTGTT CGATGGCGGG
GCGCTGCGTG CCCAGGTGCG CGCGCAGGAG GCTGCGCTGC AGCAGGCGCA GGTGGGCTAC
GAGGAATCGG TGCTTGGCGC GCTCAAGGAT GTGGAAGATG CGCTCGTCGC GCTGCAGGGC
GACCGTGACC GACTGCAGCG CCTGTCCGCC GCGGCCGAGG CTGCGGGCAA CGCGGCGCTG
CTGGCGCAGA ACCAGTATGC GAGCGGGCTG GTGGACTTCC AGACCGTGCT GGACACCCAA
CGCACGCTGC TGTCCGCGCA GGACAGCGTG GCCAGCACGG CCGCCAGCGT GAGTACCGAC
CATGTGCGCC TGTACAAGGC GCTGGGAGGC GGCTGGCCCG CGCCCTGA
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| Protein sequence | MFAAALPSRS RRRPRASAPL ALLAALVLAG CATRPPPALE GAVATPAAWA GQGAVQGGAA
ATPQDLAQWW RQLGDAQLTG LVERALQSHT SMRSARAAVE QARAQRDVQA AGLLPSVNAS
GSAQRSRSNG STGNTFQAGL DASWEPDLFG RLSSGVRASE ADLLAAEEGV AAAQVALAAE
VAVNYISLRS QQQRLQIAQQ NLAAQSETAQ IVQWRVQAGL ASSLAAEQAR AAVEQTAAQV
PTLQAGIAQA RHALAVLTGQ PPAALDEALA AHAPVPQPPA DLALAFPADT LRQRPDVRQA
EQRVRAAWER VAQAEAQRMP SLRISGTLGL RALTLGALTG GGATVASLLS SVSLPVFDGG
ALRAQVRAQE AALQQAQVGY EESVLGALKD VEDALVALQG DRDRLQRLSA AAEAAGNAAL
LAQNQYASGL VDFQTVLDTQ RTLLSAQDSV ASTAASVSTD HVRLYKALGG GWPAP
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