| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2820 |
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| Symbol | |
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| ID | 4674149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2984892 |
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| End bp | 2986205 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639839877 |
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| Product | putative transporter signal peptide protein |
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| Protein accession | YP_987037 |
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| Protein GI | 121595141 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.447107 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.311269 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGTTG CCATGATGAT CCTGCCCCGC CGCCATGTTC TGCGCGCCTG TGCGTTGGCT
CTGTCCTCCC TGCTGGGCGT TGCGACGCCG CTGGCCGGTG CAGCGGCGCC GCCCCAGGGC
GCACCGATCC GCGTGGCGCT GATCGAGAGC CTGTCTGGCA GCTTTGCCAA TACCGGCGAG
GCGGTGTTCC GCAACATCGC CTGGGCCATG GAACGTGTGA ACGCGCGCGG CGGCGTGGCA
CTGCCCCCTG CGGCGGGCGG GGCGCGGCCG CTGATGCTGG TGCGCTACGA CAGCAAGGGC
ACCAACGAAG AGGCGCTGTC CGCGCTGCGC GCCGCCATTG ACGGCGGCGC GCGTTTCGTC
ATGCAGGGCA ACTCATCGGC CACGGCCGCT GCGCTCATCG ACGCGATCAA CAAGCACAAC
CAGCGCGAGC CCGGCAAGCG TGTGGTGTTC CTGAACTACT CGGCCGTGGA CCCCGCCCTC
ACGAACGAGA AGTGCAGCTT CTGGCACTTT CGCTTCGACG CGCATGCCGA CATGCGCATG
GCAGCGCTCA TGGAGGTGAT CCGCGAGGAC AAGGCCCTGC AGCGCGCCTA CCTCATCGGG
CAGGACTACA GCTTCGGCCA GGCCGTGCTG CGCGAAGCCC GGCGCCAGCT GGCCGCGCAA
CGGCCCGATG TCGCCATCGT CGGCGACGAG CTGCACGCCG TGGGCCGCGT GAAGGACTTC
GCGCCCTACG CCGTGAAGAT CAAGGCCAGC GGCGCGCAAG CCGTCATCAC GGGCAATTGG
GGCAATGACC TCACGCTGCT GGTCAAGGCT GCGCGGGAGG TGGGCTACGA CGGCATGTTC
TATACCTTCT ACGGCAACGC GCTCGGCGCG CCTGCGGCCC TGGGCGATGC CGGCGTGGGC
AAGGTGGTGG CCGTGGCCGA CTGGCTGCCC AATCTGCCCA CGCAAGGCAG CGAGACCTTC
TACCGTGCCT TCCGCGAGCG CTTTCCCAGC CCGCAGGACG ACTATGTGCA CATGCGCATG
CAGCTCATGG TCGAAGCGCT TGCGCAGGCC CTGCAGCAGG CGGGCAGTGA CGATCCGTTG
GCCGTGGCGC GCGCGCTGGA GCATGCCAGT GTGCGCCTGT ACGGCCAGGC AGGCGCCATG
CGCGCGCAAG ACCATCAGTT CCAACAATCG CTGGTCATAG GCGTCATGGA CCGCCAGGGC
GCGCCGGGTG TGAAGTTCGA TGTGGAGGGT TCAGGCTACG GCTTTCGCGT GGTACGGCAG
ATCGCGGCGG ACAAGGCGCA AATGCCCAGC ACCTGCCAGA TGCAGCGGCT TTGA
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| Protein sequence | MSVAMMILPR RHVLRACALA LSSLLGVATP LAGAAAPPQG APIRVALIES LSGSFANTGE
AVFRNIAWAM ERVNARGGVA LPPAAGGARP LMLVRYDSKG TNEEALSALR AAIDGGARFV
MQGNSSATAA ALIDAINKHN QREPGKRVVF LNYSAVDPAL TNEKCSFWHF RFDAHADMRM
AALMEVIRED KALQRAYLIG QDYSFGQAVL REARRQLAAQ RPDVAIVGDE LHAVGRVKDF
APYAVKIKAS GAQAVITGNW GNDLTLLVKA AREVGYDGMF YTFYGNALGA PAALGDAGVG
KVVAVADWLP NLPTQGSETF YRAFRERFPS PQDDYVHMRM QLMVEALAQA LQQAGSDDPL
AVARALEHAS VRLYGQAGAM RAQDHQFQQS LVIGVMDRQG APGVKFDVEG SGYGFRVVRQ
IAADKAQMPS TCQMQRL
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