| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2813 |
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| Symbol | |
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| ID | 4674204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2976583 |
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| End bp | 2977542 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639839870 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_987030 |
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| Protein GI | 121595134 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.573371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.411949 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTGA GCAAGACGGG CTATTACACC CACCGTGACT GCTGGAAGCA CGAGATGGGC
CCAGGACACC CCGAATGCCC GGCGCGGCTG GACGCCATCG AGGATCGGCT GCTGGTGACC
GGCGTGGCCG ATGCCTTGCA GCATTGTGAG GTACCGCTGG CCTCCCTGGC CGACATCGAG
CTGGCCCACG ACCGCATGCA CATGGCCGCG CTGCGCGGCC TGTCCGACCG TCTGATCGAG
GAAGAGGCCG CGGGCGGACC GCCCTATGTG CAGGTGGACA CGGACACCTC GATGAACCGC
CACACCTGGA CGGCCGCACT GCGCGCCGCG GGCGCCGCAC TGGCCGCCAC CGACGCGGTG
ATGGCCGGAG AGATCGAGAA CGCCTTTTGC AGCGTGCGCC CGCCGGGCCA CCACGCCACG
CGCACCAAGG CCATGGGCTT TTGCTTCTTC AACAACGTGG CCATCGCCGC CAAGTACGCG
CTGCAGCGCT ACAACCTCAA GCGCGTAGCG GTGGTGGACT TCGATGTGCA CCACGGCAAC
GGCACGGAGG ACATCCTGGC CGGCGACCCG CGCGCGCTCA TGGTGAGCAT CTTCCAGCAT
CCGTTCTACC CGTACTGCGG GGACCAGGAG CCCGCGTCCA ACATGCTCAA CGTGCCCGTT
CCCGCCTACA CCAAAGGCAT GGAGGTGCGC GACATCGTGG ACATGGTTTG GATGCCGCGG
CTGGAATCGT TCAAGCCCGA GATGATCTTC GTGAGTGCGG GTTTTGACGC GCACCGCGAG
GACGACATGG GCCAGCTCGG CCTCAACGAA CAGGACTACG CCTGGATCAC CATGCGCGTC
AAGGATGTGG CCCGGCGCTT TGCCCGCGGC CGCATCGTGT CGTGCCTGGA GGGCGGCTAC
ATGATGGGGC CGCTGGCGCG CAGCGTGGAA GCCCATGTGC GCGTGTTGGC AGACCTTTGA
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| Protein sequence | MTVSKTGYYT HRDCWKHEMG PGHPECPARL DAIEDRLLVT GVADALQHCE VPLASLADIE
LAHDRMHMAA LRGLSDRLIE EEAAGGPPYV QVDTDTSMNR HTWTAALRAA GAALAATDAV
MAGEIENAFC SVRPPGHHAT RTKAMGFCFF NNVAIAAKYA LQRYNLKRVA VVDFDVHHGN
GTEDILAGDP RALMVSIFQH PFYPYCGDQE PASNMLNVPV PAYTKGMEVR DIVDMVWMPR
LESFKPEMIF VSAGFDAHRE DDMGQLGLNE QDYAWITMRV KDVARRFARG RIVSCLEGGY
MMGPLARSVE AHVRVLADL
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