Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2807 |
Symbol | |
ID | 4674237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 2969641 |
End bp | 2970597 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639839864 |
Product | 2-nitropropane dioxygenase, NPD |
Protein accession | YP_987024 |
Protein GI | 121595128 |
COG category | [R] General function prediction only |
COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.431878 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCAAAC TGCCCCCAGC GTTGCAGAAA CCCTCGCTGC CCGTCATCGG CTCGCCGCTG TTCATCATCA GCAACCCTCA GCTCGTGATC GAGCAGTGCA AGGCCGGCAT CGTGGGCTCC ATGCCTGCGC TCAACGCACG GCCGGCGGAG CAACTCGACG ACTGGCTCGC CGAGATCACC GAGACGCTGG CGGCGTGGGA CAAGGCGCAT CCCGAGTCGC CCTCCGCTCC GTTCGCCATC AACCAGATCG TGCACAAGAG CAACGACCGG CTGGAGCACG ACATGCAGGT CTGCGCCAAG TACAAGGTGC CGATCGTCAT CACCAGCCTG GGCGCGCGCG AGGACGTGAA CCAGGCCGTG CACAGCTGGG GCGGCATCGT GCTGCACGAC ATCATCAACA ACAAGTTCGC GCACAAAGCC ATCGAGAAGG GGGCCGACGG CCTCATCGCC GTGGCGGCGG GCGCGGGGGG CCACGCAGGG GTGAAGAGCC CGTTTGCGCT GATCCAGGAA ATCCGCCAAT GGTTTGACGG TCCGCTCGCG CTGTCGGGCT CCATCGCCTC GGGCGGCGCC ATCCTGGCCG CGCAGGCCAT GGGCGCGGAC TTCGCCTATA TCGGCTCGGC CTTCATCGCC ACGCACGAGG CGCGCGCCAT CGATGCGTAC AAGCAGGCCA TCGTCGAGGG CAACTCCGAC GACATCGTCT ACAGCAATCT GTTCACGGGT GTGCACGGCA ACTACCTGGC GCCGTCGATC CGCGCGGCAG GCCTGGACCC CGACAACCTA CCGGAGTCCG ATCCGAGCAA GATGAACTTC GGTGGCGACG CCAAGAAGGC ATGGAAGGAC ATCTGGGGCT GCGGCCAGGG CATCGGCAGC ATCACCGAGG TCACTTCGAC GGCTGAACTC GTCGCGCGCC TGCGCCGCGA ATACCAGCAA GCGCGCGAGC GCCTGGCCCT GGGCTGA
|
Protein sequence | MSKLPPALQK PSLPVIGSPL FIISNPQLVI EQCKAGIVGS MPALNARPAE QLDDWLAEIT ETLAAWDKAH PESPSAPFAI NQIVHKSNDR LEHDMQVCAK YKVPIVITSL GAREDVNQAV HSWGGIVLHD IINNKFAHKA IEKGADGLIA VAAGAGGHAG VKSPFALIQE IRQWFDGPLA LSGSIASGGA ILAAQAMGAD FAYIGSAFIA THEARAIDAY KQAIVEGNSD DIVYSNLFTG VHGNYLAPSI RAAGLDPDNL PESDPSKMNF GGDAKKAWKD IWGCGQGIGS ITEVTSTAEL VARLRREYQQ ARERLALG
|
| |