Gene Ajs_2803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2803 
Symbol 
ID4674135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2965298 
End bp2966506 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content69% 
IMG OID639839860 
Productradical SAM domain-containing protein 
Protein accessionYP_987020 
Protein GI121595124 
COG category[L] Replication, recombination and repair 
COG ID[COG1533] DNA repair photolyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.246146 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCTGC TGGAGCTAAA TAGATACCCC TTTTATTTAT ACAGTTATTC AGTGCATTCC 
GAAGACGACC CCCCGCCCTC ACTGGCTCCT GTCGTATGGG CGCCCGCGCA GCCGCTCAAG
GGGCGGGGTA CGGCCACGCG TATGGCCCAC CGCTTTATGC GCGATGTGCG CGAGGCGTTT
GACGACGGCT GGGGCGGGCC GGAGGAGGGG GTGACGGGCG ACGAAGGTGC CGGGCCCGCC
GCGCCGCACA CGCAGGTGAT CTGGGAAGAC GCGCGCAGCG CGCTGTGCGG CAATGATTCG
CCCGACATTT TCTTCGAGCA GTCGGTGAAC CCTTACCGCG GCTGCGAGCA TGGCTGTGTG
TACTGCTACG CACGGCCCAC GCACAGCTAC CTCAACCTGT CGCCGGGGCT GGACTTCGAG
ACCCGCATCA TCGCCAAGCG CAATATCGCC GCGGTGCTGC GGGACGAGTT GGCGCGCGCC
AGCCATCGGC CTTCGGTGGT CAACATCGGC TCCGCCACCG ACTGCTACCA GCCGGTGGAG
CGTGAGCTGC GCCTCACGCG CGCGCTGATC GAGGTGATGC GCGATGCGCG ACACCCGTTC
TCGCTGATCA CCAAGAGCAG CGGCGTGGAA CGTGACCTGG ACCTGCTGGC TCCGCTGGCG
CACAGCCGGC TGGCGGCGGC CTACGTGACC ATCACCACGC TGGATGCGCG CCTGGCCCGC
GTGCTGGAGC CGCGCGCGGC CGCGCCGCAC CGGCGGCTGC GCACCATCCG CGCGCTGGCC
GAAGCCGGCG TACCCGTCGG CGTGAGCGTG GCGCCGCAGA TTCCTTTCAT CACCGAGGAC
ATGGAGCAGG TGCTGGCCGC CGCGCGCGAC GCGGGCGCCA CCTCGGCCTT CTACACGGTG
ATCCGCCTGC CGTGGGAACT CAATGCCCTG ATGCGCGAGT GGCTGCAACT GCACTACCCG
CAGCGTGCCG AACGCGTGCT GGCGCGCATT CAGGATCTGC ACGGCATCGA CGCAACCGCG
CGTATCGCGG GCAAGAGCTA CGACAGCAGC CACGCCACGC GCATGAAGGG CTCGGGCCTG
TGGGCCGACC TGCTGCGACA GCGCTTCGAG AAGACCTGTG CGCGCCTGGG CCTGAACCGC
CAGCGCACGG AACTGGACCT GTCGCAGTAC CGCCCGGCGC TGGCGCGCGG GCAGGGCGTG
CTGTTCTGA
 
Protein sequence
MGLLELNRYP FYLYSYSVHS EDDPPPSLAP VVWAPAQPLK GRGTATRMAH RFMRDVREAF 
DDGWGGPEEG VTGDEGAGPA APHTQVIWED ARSALCGNDS PDIFFEQSVN PYRGCEHGCV
YCYARPTHSY LNLSPGLDFE TRIIAKRNIA AVLRDELARA SHRPSVVNIG SATDCYQPVE
RELRLTRALI EVMRDARHPF SLITKSSGVE RDLDLLAPLA HSRLAAAYVT ITTLDARLAR
VLEPRAAAPH RRLRTIRALA EAGVPVGVSV APQIPFITED MEQVLAAARD AGATSAFYTV
IRLPWELNAL MREWLQLHYP QRAERVLARI QDLHGIDATA RIAGKSYDSS HATRMKGSGL
WADLLRQRFE KTCARLGLNR QRTELDLSQY RPALARGQGV LF