Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2800 |
Symbol | |
ID | 4674102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 2962646 |
End bp | 2963761 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639839857 |
Product | alcohol dehydrogenase |
Protein accession | YP_987017 |
Protein GI | 121595121 |
COG category | [C] Energy production and conversion |
COG ID | [COG1062] Zn-dependent alcohol dehydrogenases, class III |
TIGRFAM ID | [TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.337169 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATCCC GCGCCGCCGT CGCCTTCAAA GCTGGTGAAC CCCTGCAGAT CGTCGAACTC GACGTGGCCC CGCCCCGCAA GGGCGAAGTA CTGGTCAAGA TCACCCACAC CGGCGTATGC CACACCGATG CCTTCACGCT CAGCGGCGAC GACCCCGAGG GCATCTTCCC CGCCGTGCTG GGCCATGAGG GCGCGGGCGT CGTGGTGGAG GTGGGCGAAG GCGTCACCAG CGTCAAGCCG GGCGACCATG TGATTCCGCT GTACACCGCC GAATGCGGCG AATGCCTGTT CTGCAAGAGC GGCAAGACCA ACCTGTGCGT GGCCGTGCGC GCCACGCAGG GCAAGGGCGT AATGCCCGAC GGCACCACGC GCTTCTCGTA CAACGGCCAG CCCGTGTACC ACTACATGGG CTGCTCCACG TTCAGCGAAT ACACCGTGGT GGCCGAGGTG TCGCTGGCCA AGGTTCACCC CGATGCCAAC CCCGAGCAGG TCTGCCTGCT GGGCTGCGGC GTGACCACCG GGCTGGGCGC GGTCAAGAAC ACCGCCAAGG TGCAGCCGGG CGACAGCGTG GCCGTGTTCG GCCTGGGCGG CATCGGCCTG GCGGTGATCC AGGGCGCCCG ACTGGCCGGC GCGGGCCGCA TCATCGCCAT CGACACCAAT CCGAGCAAGT TCGACCTGGC ACGCACCTTC GGAGCCACCG ACTGCGTGAA CCCCAAGGAC TTCGACAAGC CCATCCAGCA GGTGATCGTG GAGATGACTG GCTGGGGTGT GGACCACAGC TTCGAGTGCA TTGGCAACGT CAACGTGATG CGTGCGGCGC TGGAATGCGC ACACCGCGGC TGGGGTCAGA GCGTGATCAT CGGCGTGGCC GGTGCGGGAC AAGAGATCTC GACTCGCCCG TTCCAGCTCG TCACGGGCCG CAAGTGGCTG GGTACGGCCT TCGGCGGCGT CAAGGGCCGC AGCGAACTGC CCGGCATGGT GGAGGACGCC ATGGCCGGCA AGATCGAGCT CGCCCCGTTC GTCACCCACA CCATGGGCCT CACGGACATC AATCAGGCGT TCGACCTGAT GCACGAGGGC AAGTCGATCC GCTCGGTGGT GAACTACGCT GCATAA
|
Protein sequence | MKSRAAVAFK AGEPLQIVEL DVAPPRKGEV LVKITHTGVC HTDAFTLSGD DPEGIFPAVL GHEGAGVVVE VGEGVTSVKP GDHVIPLYTA ECGECLFCKS GKTNLCVAVR ATQGKGVMPD GTTRFSYNGQ PVYHYMGCST FSEYTVVAEV SLAKVHPDAN PEQVCLLGCG VTTGLGAVKN TAKVQPGDSV AVFGLGGIGL AVIQGARLAG AGRIIAIDTN PSKFDLARTF GATDCVNPKD FDKPIQQVIV EMTGWGVDHS FECIGNVNVM RAALECAHRG WGQSVIIGVA GAGQEISTRP FQLVTGRKWL GTAFGGVKGR SELPGMVEDA MAGKIELAPF VTHTMGLTDI NQAFDLMHEG KSIRSVVNYA A
|
| |