Gene Ajs_2793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2793 
Symbol 
ID4674370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2956992 
End bp2957426 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content64% 
IMG OID639839850 
Productsuccinate dehydrogenase subunit C 
Protein accessionYP_987010 
Protein GI121595114 
COG category[C] Energy production and conversion 
COG ID[COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit 
TIGRFAM ID[TIGR02970] succinate dehydrogenase, cytochrome b556 subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.103549 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAGC TCGCCAAGAA ACGGCCCGAA TACCGCAACA TCAACATCTT CAACGACGTG 
AGGACCTACC GCCTGCCGGC CGCGGGCTGG GTCTCCATCC TGCATCGCGC GAGCGGCATG
ATCATGTTCC TGCTGCTGCC CTTCGTGCTG TGGATGTTCG ACACCTCGGT GTCCTCGGAG
ATTTCGTTCG GCCGCTTCAC CTCCGCGTTC ACCGCGGGCC TGGGTTTCGT GCCGGGCTGG
TTCGTCAAGC TGGTGGCGCT GGCCCTGATC TGGGCCTACC TGCACCACTT CATCGCCGGC
CTGCGCCACC TGTGGATGGA CGTGAGCCAC GAGGCCGTCA GCAAGGAGTT CGGCAAGAGC
TCCGCCATCG TGACGCTGGT GCTGAGCATC GGCCTCACGC TGGTGCTGGG CGCCAAGCTG
TTCGGCCTGT ACTGA
 
Protein sequence
MTELAKKRPE YRNINIFNDV RTYRLPAAGW VSILHRASGM IMFLLLPFVL WMFDTSVSSE 
ISFGRFTSAF TAGLGFVPGW FVKLVALALI WAYLHHFIAG LRHLWMDVSH EAVSKEFGKS
SAIVTLVLSI GLTLVLGAKL FGLY