Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2780 |
Symbol | |
ID | 4674574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 2942766 |
End bp | 2944106 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639839837 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_986997 |
Protein GI | 121595101 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.892917 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCAT CCGCAAACTC CGCCCCCTCC TCCCCGCCCG CCCTGAAGGC GCGCTCGGCC GATGCCGCGG CCGGGCTGAA AAACCTGCAC CAGCTCATCC AGTTGCGCTG GATCGCCGTG GTGGGCCAGG TGTTCACCAT CGAGGTGGCG CACTACGTGC TGCAGCTTCC CCTGCCCCTG CGCGAGATGC TCATGGTCGT GGGCTGCCTA GTGCTCTACA ACGCGGTGAG CTTCGTGCGC TGGCGCACCG GCCGCGGCGT GCGCAATGTG GAGCTGTTTC TGGCGCTGTT GGTGGACGTA GCCGTGCTCA CCGTGCAGCT GTATCTGAGC GGGGGCATCC GCAACCCATT CGTCTTCTTG TACCTGCTGC AGGTGGCGCT GGGCGCGGCG CTGCTGCGCA GCGCCTACAT CTGGACCATG GTGCTCGTCA CCGCAGCCTG CTTTGCGCTG CTGGCGCATT ACAGCGTGCC ATTGCAACTG GCGCCCGACT TCGCGCGCGG GCTGGGCAGC CCCTACGTGC TGGGCCTGCT GGTGTGCTTC ATGCTCAACG CGGCGCTGGT GGTGATCTTC ATCAGCCGCA TCGGCCAGAA CCTGCGCCAG CGGGACGCGC GTCTGGCCGC CATACGTCAA CGCGCCGCCG AGGAAGAGCA CGTGGTGCGC ATGGGGCTGC TGGCTTCAGG CGCGGCCCAT GAGCTGGGCA CGCCGCTGGC CACCATGGCG GTGATCCTGG GGGACTGGAA GCGTGATCCT GCATTGGCCG CCAACGCCGC GCTGCAGGAA GACGTGGCCG AGATGCAGGC GCAGGTGCAG CGCTGCAAGA CCATCGTCAG CGGCATCCTG ATGTCCGCCG GCGAGACGCG CGGCGAGGCA TCGGCGCAGA CCACCGTGTG CCAGTTCCTG GACACGCTCG CCAGCGAGTG GCAGGCCACG CGCTCGGTTG ATGAATTCAC TTATGACAAC CGCTTCGGCC AGGACACCCC CATGGTGTCC GATGTCACGC TGCAGCAAAT GGTTTTCAAT GTGTTGGACA ATGCCCGCGA CGCATCGCCC CACCGGGTCG GCCTGGTGGC CGAGCGTGAT CAAGACCTGC TGCGCATTAC CGTCACCGAT GATGGCCCCG GCTTCGCGCC GGCCATGCTG TCGCAGTTCG GCAAGCCCTA CCAGTCCAGC AAGGGCCGCC CCGGCGGCGG GCTGGGCCTG TTCCTGGCAA TGAACGTGGC GCGCACCCTG GGGGGCACCG TGCAGGCACG CAACCTTCCG GGCGGCGGCG CCCGGGTCAC GATCACGCTG CCGCTGGCCG CGATTGCGTT GCAGGAGACA CCCACGCACC ATGGACGCTG A
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Protein sequence | MTASANSAPS SPPALKARSA DAAAGLKNLH QLIQLRWIAV VGQVFTIEVA HYVLQLPLPL REMLMVVGCL VLYNAVSFVR WRTGRGVRNV ELFLALLVDV AVLTVQLYLS GGIRNPFVFL YLLQVALGAA LLRSAYIWTM VLVTAACFAL LAHYSVPLQL APDFARGLGS PYVLGLLVCF MLNAALVVIF ISRIGQNLRQ RDARLAAIRQ RAAEEEHVVR MGLLASGAAH ELGTPLATMA VILGDWKRDP ALAANAALQE DVAEMQAQVQ RCKTIVSGIL MSAGETRGEA SAQTTVCQFL DTLASEWQAT RSVDEFTYDN RFGQDTPMVS DVTLQQMVFN VLDNARDASP HRVGLVAERD QDLLRITVTD DGPGFAPAML SQFGKPYQSS KGRPGGGLGL FLAMNVARTL GGTVQARNLP GGGARVTITL PLAAIALQET PTHHGR
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