Gene Ajs_2780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2780 
Symbol 
ID4674574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2942766 
End bp2944106 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content68% 
IMG OID639839837 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_986997 
Protein GI121595101 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.892917 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAT CCGCAAACTC CGCCCCCTCC TCCCCGCCCG CCCTGAAGGC GCGCTCGGCC 
GATGCCGCGG CCGGGCTGAA AAACCTGCAC CAGCTCATCC AGTTGCGCTG GATCGCCGTG
GTGGGCCAGG TGTTCACCAT CGAGGTGGCG CACTACGTGC TGCAGCTTCC CCTGCCCCTG
CGCGAGATGC TCATGGTCGT GGGCTGCCTA GTGCTCTACA ACGCGGTGAG CTTCGTGCGC
TGGCGCACCG GCCGCGGCGT GCGCAATGTG GAGCTGTTTC TGGCGCTGTT GGTGGACGTA
GCCGTGCTCA CCGTGCAGCT GTATCTGAGC GGGGGCATCC GCAACCCATT CGTCTTCTTG
TACCTGCTGC AGGTGGCGCT GGGCGCGGCG CTGCTGCGCA GCGCCTACAT CTGGACCATG
GTGCTCGTCA CCGCAGCCTG CTTTGCGCTG CTGGCGCATT ACAGCGTGCC ATTGCAACTG
GCGCCCGACT TCGCGCGCGG GCTGGGCAGC CCCTACGTGC TGGGCCTGCT GGTGTGCTTC
ATGCTCAACG CGGCGCTGGT GGTGATCTTC ATCAGCCGCA TCGGCCAGAA CCTGCGCCAG
CGGGACGCGC GTCTGGCCGC CATACGTCAA CGCGCCGCCG AGGAAGAGCA CGTGGTGCGC
ATGGGGCTGC TGGCTTCAGG CGCGGCCCAT GAGCTGGGCA CGCCGCTGGC CACCATGGCG
GTGATCCTGG GGGACTGGAA GCGTGATCCT GCATTGGCCG CCAACGCCGC GCTGCAGGAA
GACGTGGCCG AGATGCAGGC GCAGGTGCAG CGCTGCAAGA CCATCGTCAG CGGCATCCTG
ATGTCCGCCG GCGAGACGCG CGGCGAGGCA TCGGCGCAGA CCACCGTGTG CCAGTTCCTG
GACACGCTCG CCAGCGAGTG GCAGGCCACG CGCTCGGTTG ATGAATTCAC TTATGACAAC
CGCTTCGGCC AGGACACCCC CATGGTGTCC GATGTCACGC TGCAGCAAAT GGTTTTCAAT
GTGTTGGACA ATGCCCGCGA CGCATCGCCC CACCGGGTCG GCCTGGTGGC CGAGCGTGAT
CAAGACCTGC TGCGCATTAC CGTCACCGAT GATGGCCCCG GCTTCGCGCC GGCCATGCTG
TCGCAGTTCG GCAAGCCCTA CCAGTCCAGC AAGGGCCGCC CCGGCGGCGG GCTGGGCCTG
TTCCTGGCAA TGAACGTGGC GCGCACCCTG GGGGGCACCG TGCAGGCACG CAACCTTCCG
GGCGGCGGCG CCCGGGTCAC GATCACGCTG CCGCTGGCCG CGATTGCGTT GCAGGAGACA
CCCACGCACC ATGGACGCTG A
 
Protein sequence
MTASANSAPS SPPALKARSA DAAAGLKNLH QLIQLRWIAV VGQVFTIEVA HYVLQLPLPL 
REMLMVVGCL VLYNAVSFVR WRTGRGVRNV ELFLALLVDV AVLTVQLYLS GGIRNPFVFL
YLLQVALGAA LLRSAYIWTM VLVTAACFAL LAHYSVPLQL APDFARGLGS PYVLGLLVCF
MLNAALVVIF ISRIGQNLRQ RDARLAAIRQ RAAEEEHVVR MGLLASGAAH ELGTPLATMA
VILGDWKRDP ALAANAALQE DVAEMQAQVQ RCKTIVSGIL MSAGETRGEA SAQTTVCQFL
DTLASEWQAT RSVDEFTYDN RFGQDTPMVS DVTLQQMVFN VLDNARDASP HRVGLVAERD
QDLLRITVTD DGPGFAPAML SQFGKPYQSS KGRPGGGLGL FLAMNVARTL GGTVQARNLP
GGGARVTITL PLAAIALQET PTHHGR