Gene Ajs_2778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2778 
Symbol 
ID4674587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2941520 
End bp2941948 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content62% 
IMG OID639839835 
Productcytochrome C oxidase subunit IV 
Protein accessionYP_986995 
Protein GI121595099 
COG category[C] Energy production and conversion 
COG ID[COG3125] Heme/copper-type cytochrome/quinol oxidase, subunit 4 
TIGRFAM ID[TIGR02847] cytochrome o ubiquinol oxidase subunit IV 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.706445 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAC ACGACATTCA CGCCGGCCAC GCCGGGCACG ACGACCATGG CCACGACCAT 
GACGACCTGC ACGTCACCAA GGGCGACTAC GTCAAAGGTT TCATCCTGGC GGTCATCCTC
ACCGTGATTC CCTTTGCCCT GGTGATGGGC GACGTGATCC AGAACCGCAG CACCGCCGTG
CTGGTGCTGG GCATCTTCGC GATGGTCCAG GTGGTGGTGC ACATGGTGTA CTTCCTGCAC
ATGAACGGCA AGATCCAGGG CGGCTGGACG ATGCTGTCCA CCATCTTCAC CATCGTGTTC
CTGGCAGTGA CCATCATCGG CACGTTGTGG GTCATGTTCC ACATGAACGC CAACATGATG
CCCGCGCACG CCAACCCCAT GGCCGCACAG CACCAGGGCA GCGAGGCACA CCAGCCGAAG
GCGCCTTGA
 
Protein sequence
MSAHDIHAGH AGHDDHGHDH DDLHVTKGDY VKGFILAVIL TVIPFALVMG DVIQNRSTAV 
LVLGIFAMVQ VVVHMVYFLH MNGKIQGGWT MLSTIFTIVF LAVTIIGTLW VMFHMNANMM
PAHANPMAAQ HQGSEAHQPK AP